Skip to content

DESeq2 adjusted p-value threshold and minor bugfixes

Compare
Choose a tag to compare
@drewjbeh drewjbeh released this 22 Jun 18:14
· 252 commits to master since this release

New features and minor bugfixes

Adjusted p-value threshold (#14)

  • Users can now set an adjusted p-value threshold for plots generated from DESeq2 differential expression analysis. Default is adj. p-value <= 0.05.
  • Adj. p-value now also displayed on all *-diffexpr-countplot.pdf files

Bugfixes

  • knownMods table now a defaultdict(list) to prevent KeyError after 1st mapping round and subtracting predicted from known mods in unknownMods() - (#9)