Add correct filtered sv output

mskcc · Nov 11, 2024 · 8b65eea · 8b65eea
1 parent 4fa61c6
commit 8b65eea
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/subworkflows/local/sv.nf b/subworkflows/local/sv.nf
@@ -99,7 +99,7 @@ workflow SV {
 
     emit:
     sv = BCFTOOLS_CONCAT_SV.out.vcf
-    sv_filtered = BCFTOOLS_CONCAT_SV.out.vcf
+    sv_filtered = BCFTOOLS_CONCAT_FILTERED_SV.out.vcf
     maf_file = ADD_MAF_COMMENT.out.maf
     portal = FORMAT_MAF.out.portal
     versions = ch_versions