Removed unecessary files. Tested if examples work

mochell · Sep 17, 2024 · 0e2a201 · 0e2a201
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Showing 43 changed files with 253 additions and 1,240 deletions.
diff --git a/README.md b/README.md
@@ -54,6 +54,9 @@ To run the `T04_2D_reg_test.jl` file from the command line, follow these steps:
     ```
 5. The test will run and display the results in the terminal.
 
+This will create some .gifs in the local folder plots/tests/
+
+
 ## Basic model structure
 PiCLES follows the modular model structure from [Oceananigans.jl](https://clima.github.io/OceananigansDocumentation/stable/), but it does not currently share objects. Functionality from Oceananigans does not work in PiCLES.
 

diff --git a/examples/_example_eq_v3.jl b/examples/_example_eq_v3.jl
diff --git a/examples/_example_eq_v4.jl b/examples/_example_eq_v4.jl
diff --git a/tests/B01_1D_regtest_wave_growth.jl b/tests/B01_1D_regtest_wave_growth.jl
@@ -68,7 +68,7 @@ mkpath(save_path)
 
 # %%
 # function to define constants 
-Revise.retry()
+
 ODEpars, Const_ID, Const_Scg = PW.ODEParameters(r_g=0.85)
 
 # @info "org. gamma gamma= " Const_ID.γ

diff --git a/tests/B02_2D_regtest_netCDF.jl b/tests/B02_2D_regtest_netCDF.jl
@@ -81,7 +81,7 @@ end
 
 
 
-Revise.retry()
+
 # Default initial conditions based on timestep and chaeracteristic wind velocity
 WindSeamin = FetchRelations.MinimalWindsea(U10, V10, DT)
 default_particle = ParticleDefaults(WindSeamin["lne"], WindSeamin["cg_bar_x"], WindSeamin["cg_bar_y"], 0.0, 0.0)

diff --git a/tests/B03_2D_regtest_moving_fetch_netCDF.jl b/tests/B03_2D_regtest_moving_fetch_netCDF.jl
@@ -52,7 +52,7 @@ DT = 30minutes
 
 # Define basic ODE parameters
 ODEpars, Const_ID, Const_Scg = PW.ODEParameters(r_g=0.85)
-Revise.retry()
+
 
 function interpolate_winds(ds, multiplyer=0)
 
@@ -78,7 +78,7 @@ end
 # define ODE system and parameters
 #particle_system = PW.particle_equations(u, v, γ=Const_ID.γ, q=Const_ID.q);
 
-Revise.retry()
+
 # Default initial conditions based on timestep and chaeracteristic wind velocity
 WindSeamin = FetchRelations.MinimalWindsea(2, 2, DT)
 

diff --git a/tests/T01_test_PIC_1D.jl b/tests/T01_test_PIC_1D.jl
@@ -81,7 +81,7 @@ function convert_store_to_tuple(p_collect, grid1d)
 end
 
 # %%
-Revise.retry()
+
 n_particles = 101
 eta_min, eta_max =0, 20
 grid1d = OneDGrid(eta_min, eta_max, n_particles)
@@ -167,7 +167,7 @@ animate(x_collect, p_collect, grid1d, path=plot_path_base, name="T01_PIC_1D_back
 
 
 # %% diverging sin
-Revise.retry()
+
 xp = grid1dnotes.x .+ grid1dnotes.dx * 1.5 #+ rand(n_particles)/5
 #charges_1d = rand(n_particles)* 0 .+ 1
 charges_1d = sin.(xp) *0.4 .+0.2

diff --git a/tests/T02_single_particle_1d.jl b/tests/T02_single_particle_1d.jl
@@ -37,7 +37,7 @@ T = 24 * 2 * 60 * 60 # seconds
 ## u must be always a function of x and t !!!
 u(x, t) = x .* 0 + t * 0 + U10
 
-Revise.retry()
+
 particle_system = PW5.particle_equations(u, γ=γ)
 
 # define variables based on particle equation
@@ -61,7 +61,7 @@ cb = ContinuousCallback(condition, affect!)
 WindSeamin = FetchRelations.get_initial_windsea(u(0, 0), 5minutes)
 #WindSeamin = FetchRelations.MinimalWindsea( u(0, 0), 5minutes)
 
-Revise.retry()
+
 
 ODE_settings = PW5.ODESettings(
     Parameters=default_ODE_parameters,
@@ -213,7 +213,7 @@ using Oceananigans.Units
 using PiCLES.Simulations
 using PiCLES.Plotting
 
-Revise.retry()
+
 
 u10 = 10
 u(x, t) = x .* 0 + t * 0 + u10
@@ -244,7 +244,7 @@ savefig(joinpath(plot_path_base, "PW4_u$(u10)_per_" * string(wave_model.periodic
 
 # %%
 @info "experiment 1: positive winds, non-periodic \n"
-Revise.retry()
+
 
 wave_model.periodic_boundary = false
 # reset boundary array in model
@@ -275,7 +275,7 @@ Plotting.plot_results(wave_simulation, title="$u10 m/s, periodic=" * string(wave
 savefig(joinpath(plot_path_base, "PW4_u$(u10)_per_" * string(wave_model.periodic_boundary) * ".png"))
 
 # %%
-#Revise.retry()
+#
 @info "experiment 1: nagative winds, non-perodic \n"
 u10 = -10
 u(x, t) = x .* 0 + t * 0 + u10