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Python for Data Analysis Project (2018)

Marina McCowin

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popart_project: converting my .csv data to a PopART-readable traits block for haplotype network creation

  • pandas_to_popart.ipynb - shows the traits block creation step by step in an iPython notebook
  • popART_traits.ipynb - use this notebook for converting a spreadsheet (.csv format) to traits block (can use either Mac or Windows)
  • popART_traits_MAC.ipynb - Mac-specific version
  • popART_traits_Windows.ipynb - Windows-specific version
  • thermi_testC.csv - example file for use with popART_traits
  • thermi_testN.nex - example file for use with popART_traits
  • thermi_testN_popART.nex - example OUTPUT file from popART_traits

status_bar: using seaborn and matplotlib to visualize progress in the lab

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