next version preparation (0.2.8 on pypi now)

VERSION

@@ -1 +1 @@
-0.2.8
+0.2.9

docs/conf.py

@@ -24,9 +24,9 @@
 author = 'Mirko Mälicke'
 
 # The short X.Y version
-version = '0.2.8'
+version = '0.2.9'
 # The full version, including alpha/beta/rc tags
-release = '0.2.8'
+release = '0.2.9'
 
 
 # -- General configuration ---------------------------------------------------

scikit-gstat-0.2.8/LICENSE

@@ -0,0 +1,21 @@
+MIT License
+
+Copyright (c) 2017 Mirko Mälicke
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

scikit-gstat-0.2.8/README.rst

@@ -0,0 +1,137 @@
+SciKit-GStat
+============
+
+Info: scikit-gstat needs Python >= 3.5!
+
+.. image:: https://img.shields.io/badge/pypi%20package-0.2.7-green.svg
+    :target: https://pypi.org/project/scikit-gstat/0.2.7/
+
+.. image:: https://img.shields.io/badge/version-0.2.8-green.svg
+    :target: https://github.com/mmaelicke/scikit-gstat
+
+.. image:: https://travis-ci.org/mmaelicke/scikit-gstat.svg?branch=master
+    :target: https://travis-ci.org/mmaelicke/scikit-gstat
+    :alt: Build Status
+
+.. image:: https://api.codacy.com/project/badge/Grade/34022fb8b795435b8eeb5431159fa7c6
+   :alt: Codacy Badge
+   :target: https://app.codacy.com/app/mmaelicke/scikit-gstat?utm_source=github.com&utm_medium=referral&utm_content=mmaelicke/scikit-gstat&utm_campaign=Badge_Grade_Dashboard
+
+.. image:: https://codecov.io/gh/mmaelicke/scikit-gstat/branch/master/graph/badge.svg
+    :target: https://codecov.io/gh/mmaelicke/scikit-gstat
+    :alt: Codecov
+
+.. image:: https://zenodo.org/badge/98853365.svg
+   :target: https://zenodo.org/badge/latestdoi/98853365
+
+How to cite
+-----------
+
+In case you use SciKit-GStat in other software or scientific publications,
+please reference this module. It is published and has a DOI. It can be cited
+as:
+
+  Mirko Mälicke, & Helge David Schneider. (2019, November 25). Scikit-GStat 0.2.7: A scipy flavored geostatistical analysis toolbox written in Python. (Version v.0.2.7). Zenodo. http://doi.org/10.5281/zenodo.3552235
+
+
+
+Full Documentation
+------------------
+
+The full documentation can be found at: https://mmaelicke.github.io/scikit-gstat
+
+Description
+-----------
+
+SciKit-Gstat is a scipy-styled analysis module for geostatistics. It includes
+two base classes ``Variogram`` and ``OrdinaryKriging``. Additionally, various
+variogram classes inheriting from ``Variogram`` are available for solving
+directional or space-time related tasks.
+The module makes use of a rich selection of semi-variance
+estimators and variogram model functions, while being extensible at the same
+time.
+The estimators include:
+
+- matheron
+- cressie
+- dowd
+- genton
+- entropy
+- two experimental ones: quantiles, minmax
+
+The models include:
+
+- sperical
+- exponential
+- gaussian
+- cubic
+- stable
+- matérn
+
+with all of them in a nugget and no-nugget variation. All the estimator are
+implemented using numba's jit decorator. The usage of numba might be subject
+to change in future versions.
+
+
+Installation
+~~~~~~~~~~~~
+
+PyPI:
+
+.. code-block:: bash
+
+  pip install scikit-gstat
+
+GIT:
+
+.. code-block:: bash
+
+  git clone https://github.com/mmaelicke/scikit-gstat.git
+  cd scikit-gstat
+  pip install -r requirements.txt
+  pip install -e .
+
+**Note:** It can happen that the installation of shapely, numba or numpy is failing using pip. Especially on Windows systems. Usually, a missing Dll (see eg. `#31 <https://github.com/mmaelicke/scikit-gstat/issues/31>`_) or visual c++ redistributable is the reason. These errors are not caused by pip, scikit-gstat or the respective packages and there are a lot of issues in the shapely and numpy repo concerning these problems. Usually, the best workaround is to install especially shapely independent from scikit-gstat. As far as I know, these problems do not apply if anaconda is used like:
+
+.. code-block:: bash
+  
+  conda install shapely numpy
+
+Usage
+~~~~~
+
+The `Variogram` class needs at least a list of coordiantes and values.
+All other attributes are set by default.
+You can easily set up an example by generating some random data:
+
+.. code-block:: python
+
+  import numpy as np
+  import skgstat as skg
+
+  coordinates = np.random.gamma(0.7, 2, (30,2))
+  values = np.random.gamma(2, 2, 30)
+
+  V = skg.Variogram(coordinates=coordinates, values=values)
+  print(V)
+
+.. code-block:: bash
+
+  spherical Variogram
+  -------------------
+  Estimator:    matheron
+  Range:        1.64
+  Sill:         5.35
+  Nugget:       0.00
+  
+  
+New Version 0.2
+---------------
+
+Scikit-gstat was rewritten in major parts. Most of the changes are internal,
+but the attributes and behaviour of the `Variogram` has also changed
+substantially.
+A detailed description of of the new versions usage will follow. The last
+version of the old Variogram class, 0.1.8, is kept in the `version-0.1.8`
+branch on GitHub, but not developed any further. Those two versions are not
+compatible.

skgstat/__init__.py

@@ -5,5 +5,5 @@
 from . import interfaces
 
 # set some stuff
-__version__ = '0.2.8'
+__version__ = '0.2.9'
 __author__ = 'Mirko Maelicke <[email protected]>'