v11.1.0

What's Changed

• Move valid src/data/invalid/DissolvingProcess-minimal-no-solvent.yaml to src/data/problem/invalid/DissolvingProcess-minimal-no-solvent.yaml by @turbomam in #2201
• Replace usages of api-berkeley in Makefiles and SPARQL with production API references by @turbomam in #2213
• No more scalar in_subsets by @turbomam in #2218
• Fix spelling errors in pyproject.toml by @turbomam in #2209
• Add custom jinja template for slot documentation pages by @sujaypatil96 in #2140
• Update comments about collection omission or modification in pure-export in project.Makefile by @turbomam in #2220
• Add figshare as a permissible value to doi provider enumeration by @aclum in #2210
• Add kegg module prefix by @aclum in #2211
• Resolve 634 azenta by @aclum in #2224
• Add genomad files to FileTypeEnum by @aclum in #2228
• Resolve 2182 add genomad file type enumerations by @aclum in #2229
• Make updates to MagsAnalysis slots by @aclum in #2225
• Write v10 vs v11/berkeley documentation by @turbomam in #2227
• Include inter-collection relationship graph in schema documentation by @eecavanna in #2241
• Move has_calibration from workflow_execution_set to data_generation_set by @brynnz22 in #2235
• Delete PR template by @mslarae13 in #2237
• Remove direct_infusion_category and DirectInfusionEnum by @samobermiller in #2248
• Add Manifest class by @kheal in #2230
• Update FunctionalAnnotationAggMember class for compatibility with MetaP Aggregation tables and implement migrator by @kheal in #2203
• Migrator: Update _from_version and _to_version to reflect role of migrator by @eecavanna in #2254
• Remove has_peptide_quantifications, deprecate associated classes and slots, and implement migrator by @kheal in #2251
• Migrations: Implement adapter method that copies values between two fields in all documents in a collection by @eecavanna in #2262
• Migrations: Implement adapter method that deletes field from all documents in collection by @eecavanna in #2263
• Migrations: Update migrator to run faster by delegating document iteration to MongoDB by @eecavanna in #2265
• Generate release artifacts for NMDC Schema version 11.1.0 by @eecavanna in #2266

New Contributors

• @samobermiller made their first contribution in #2248
• @kheal made their first contribution in #2230

Full Changelog: v11.0.3...v11.1.0