DESCRIPTION

Package: miaTime
Type: Package
Title: Microbiome Time Series Analysis
Version: 0.99.0
Authors@R:
     c(person(given = "Leo", family = "Lahti", role = c("aut"),
              email = "leo.lahti@iki.fi",
              comment = c(ORCID = "0000-0001-5537-637X")),
       person(given = "Tuomas", family = "Borman", role = c("aut", "cre"),
              email = "tuomas.v.borman@utu.fi",
              comment = c(ORCID = "0000-0002-8563-8884")),
       person(given = "Yagmur", family = "Simsek", role = c("aut"),
              email = "yagmur.simsek@hsrw.org"),
       person(given = "Sudarshan", family = "Shetty", role = c("ctb"),
              email = "sudarshanshetty9@gmail.com"),
       person(given = "Chouaib", family = "Benchraka", role = c("ctb")),
      person(given = "Muluh", family = "Muluh", role = c("ctb"))
        )
Description:
    The `miaTime` package provides tools for microbiome time series analysis
    based on (Tree)SummarizedExperiment infrastructure.
biocViews: Microbiome, Software, Sequencing
License: Artistic-2.0 | file LICENSE
Depends:
    R (>= 4.4.0),
    mia
Imports:
    dplyr,
    methods,
    S4Vectors,
    SingleCellExperiment,
    SummarizedExperiment,
    TreeSummarizedExperiment
Suggests:
    BiocStyle,
    devtools,
    ggplot2,
    knitr,
    lubridate,
    miaViz,
    rmarkdown,
    scater,
    testthat,
    vegan
URL: https://github.com/microbiome/miaTime
BugReports: https://github.com/microbiome/miaTime/issues
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
VignetteBuilder: knitr