Fix dataset cli #567
Workflow file for this run
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| # This workflow will install Python dependencies, run tests and lint with a single version of Python | |
| # For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python | |
| name: Tests | |
| on: | |
| push: | |
| branches: [ "main" ] | |
| pull_request: | |
| branches: [ "main" ] | |
| permissions: | |
| contents: read | |
| jobs: | |
| tests: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Get python version from env.yaml | |
| id: python_version | |
| run: echo PYTHON_VERS=$(cat env.yaml | grep python= | sed 's/.*python=\([0-9]\.[0-9]*\.[0-9]*\).*/\1/') >> $GITHUB_OUTPUT | |
| - name: Set up Python ${{ steps.python_version.outputs.PYTHON_VERS }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: "${{ steps.python_version.outputs.PYTHON_VERS }}" | |
| - name: Get pytorch version from env.yaml | |
| id: pytorch_version | |
| run: echo PYTORCH_VERS=$(cat env.yaml | grep torch== | sed 's/.*torch==\(.*\)/\1/') >> $GITHUB_OUTPUT | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -r requirements.txt \ | |
| torch==${{ steps.pytorch_version.outputs.PYTORCH_VERS }} | |
| pip install -r requirements_lint.txt | |
| pip install --editable . | |
| - name: Lint | |
| run: | | |
| ./lint.sh . | |
| - name: Integration Test with pytest | |
| run: | | |
| export PY4CAST_ROOTDIR=`pwd` | |
| coverage run -p -m pytest tests/ | |
| coverage run -p bin/train.py --precision 32 --model HalfUNet --model_conf config/models/halfunet32.json --dataset dummy --epochs 1 --batch_size 1 --num_pred_steps_train 1 --limit_train_batches 1 --num_workers 1 | |
| coverage run -p bin/train.py --precision 32 --model HalfUNet --model_conf config/models/halfunet32.json --dataset dummy --epochs 1 --batch_size 1 --num_pred_steps_train 1 --limit_train_batches 1 --num_workers 1 --strategy scaled_ar | |
| coverage run -p bin/inference.py --dataset dummy --model_path /home/runner/work/py4cast/py4cast/logs/camp0/dummy/HalfUNet/runn_run_0/ | |
| coverage run -p bin/train.py --precision 32 --model HiLAM --dataset dummy --epochs 1 --batch_size 1 --num_pred_steps_train 1 --limit_train_batches 1 --num_workers 1 --pin_memory | |
| coverage run -p bin/train.py --precision 32 --model UNETRPP --dataset dummy --epochs 1 --batch_size 1 --num_pred_steps_train 1 --limit_train_batches 1 --num_workers 1 | |
| coverage combine | |
| coverage report --ignore-errors --fail-under=60 |