add Developpment/Extensions

README.md

@@ -28,3 +28,15 @@ You can start using atlas with three commands:
 > Kieser, S., Brown, J., Zdobnov, E. M., Trajkovski, M. & McCue, L. A.   
 > BMC Bioinformatics 21, 257 (2020).  
 > doi: [10.1186/s12859-020-03585-4](https://doi.org/10.1186/s12859-020-03585-4)
+
+
+# Developpment/Extensions
+
+Here are some ideas I work or want to work on when I have time. If you want to contribute or have some ideas let me know via a feature request issue.
+
+- Optimized MAG recovery (e.g. [Spacegraphcats](https://github.com/spacegraphcats/spacegraphcats)) 
+- Integration of viruses/plasmid that live for now as [extensions](https://github.com/metagenome-atlas/virome_atlas)
+- Add statistics and visualisations as in [atlas_analyze](https://github.com/metagenome-atlas/atlas_analyze)
+- Implementation of most rules as snakemake wrapper
+- Cloud execution
+- Update to new nakemake version and use cool reports.