Update r-deseqanalysis to 0.7.0 (bioconda#43470)

* Update r-deseqanalysis to 0.7.0 * Update dependencies * Add pinning info --------- Co-authored-by: Michael Steinbaugh <[email protected]>
mencian · Oct 11, 2023 · 5410127 · 5410127
1 parent 299decc
commit 5410127
Showing 1 changed file with 54 additions and 48 deletions.
diff --git a/recipes/r-deseqanalysis/meta.yaml b/recipes/r-deseqanalysis/meta.yaml
@@ -1,4 +1,4 @@
-{% set version = "0.6.12" %}
+{% set version = "0.7.0" %}
 {% set github = "https://github.com/acidgenomics/r-deseqanalysis" %}
 
 package:
@@ -7,71 +7,77 @@ package:
 
 source:
   url: "{{ github }}/archive/v{{ version }}.tar.gz"
-  sha256: 6c6cde768a5ba7eb78fc2b456d97902c4cc3ce5094df737d2f063b997a24eb8b
+  sha256: cf5b1cae6fa44e0db16cba3aab8de0d738ab26af7326f9ff24ee42ffb05574d6
 
 build:
   noarch: generic
   number: 0
+  run_exports:
+    - {{ pin_subpackage('r-deseqanalysis', max_pin="x.x") }}
 
 requirements:
   host:
     # Depends:
     - r-base
-    - bioconductor-deseq2 >=1.40.0
     # Imports:
     - bioconductor-biocgenerics >=0.46.0
-    - bioconductor-iranges >=2.32.0
-    - bioconductor-s4vectors >=0.36.0
-    - bioconductor-summarizedexperiment >=1.28.0
-    - r-acidbase >=0.6.15
-    - r-acidcli >=0.2.7
-    - r-acidexperiment >=0.4.7
-    - r-acidgenerics >=0.6.7
-    - r-acidgenomes >=0.5.0
-    - r-acidmarkdown >=0.2.5
-    - r-acidplots >=0.5.5
-    - r-acidplyr >=0.3.10
-    - r-ggplot2 >=3.4.2
-    - r-goalie >=0.6.9
-    - r-pipette >=0.10.9
-    - r-stringi >=1.7.12
-    - r-syntactic >=0.6.5
+    - bioconductor-deseq2 >=1.40.0
+    - bioconductor-iranges >=2.34.0
+    - bioconductor-s4vectors >=0.38.0
+    - bioconductor-summarizedexperiment >=1.30.0
+    - r-acidbase >=0.7.0
+    - r-acidcli >=0.2.8
+    - r-acidexperiment >=0.4.8
+    - r-acidgenerics >=0.6.13
+    - r-acidgenomes >=0.5.2
+    - r-acidmarkdown >=0.2.6
+    - r-acidplots >=0.6.2
+    - r-acidplyr >=0.4.2
+    - r-ggplot2 >=3.4.3
+    - r-goalie >=0.6.19
+    - r-pipette >=0.14.0
+    - r-syntactic >=0.6.7
     # Suggests:
-    - bioconductor-apeglm >=1.20.0
-    - bioconductor-tximport >=1.26.0
-    - r-ashr >=2.2.54
-    - r-basejump >=0.16.5
-    - r-knitr >=1.42
-    - r-rmarkdown >=2.21
+    - bioconductor-apeglm >=1.22.0
+    - bioconductor-tximport >=1.28.0
+    - r-ashr >=2.2.63
+    - r-basejump >=0.17.0
+    - r-complexupset >=1.3.3
+    - r-ggrepel >=0.9.3
+    - r-knitr >=1.44
+    - r-pheatmap >=1.0.12
+    - r-rmarkdown >=2.25
   run:
     # Depends:
     - r-base
-    - bioconductor-deseq2 >=1.40.0
     # Imports:
     - bioconductor-biocgenerics >=0.46.0
-    - bioconductor-iranges >=2.32.0
-    - bioconductor-s4vectors >=0.36.0
-    - bioconductor-summarizedexperiment >=1.28.0
-    - r-acidbase >=0.6.15
-    - r-acidcli >=0.2.7
-    - r-acidexperiment >=0.4.7
-    - r-acidgenerics >=0.6.7
-    - r-acidgenomes >=0.5.0
-    - r-acidmarkdown >=0.2.5
-    - r-acidplots >=0.5.5
-    - r-acidplyr >=0.3.10
-    - r-ggplot2 >=3.4.2
-    - r-goalie >=0.6.9
-    - r-pipette >=0.10.9
-    - r-stringi >=1.7.12
-    - r-syntactic >=0.6.5
+    - bioconductor-deseq2 >=1.40.0
+    - bioconductor-iranges >=2.34.0
+    - bioconductor-s4vectors >=0.38.0
+    - bioconductor-summarizedexperiment >=1.30.0
+    - r-acidbase >=0.7.0
+    - r-acidcli >=0.2.8
+    - r-acidexperiment >=0.4.8
+    - r-acidgenerics >=0.6.13
+    - r-acidgenomes >=0.5.2
+    - r-acidmarkdown >=0.2.6
+    - r-acidplots >=0.6.2
+    - r-acidplyr >=0.4.2
+    - r-ggplot2 >=3.4.3
+    - r-goalie >=0.6.19
+    - r-pipette >=0.14.0
+    - r-syntactic >=0.6.7
     # Suggests:
-    - bioconductor-apeglm >=1.20.0
-    - bioconductor-tximport >=1.26.0
-    - r-ashr >=2.2.54
-    - r-basejump >=0.16.5
-    - r-knitr >=1.42
-    - r-rmarkdown >=2.21
+    - bioconductor-apeglm >=1.22.0
+    - bioconductor-tximport >=1.28.0
+    - r-ashr >=2.2.63
+    - r-basejump >=0.17.0
+    - r-complexupset >=1.3.3
+    - r-ggrepel >=0.9.3
+    - r-knitr >=1.44
+    - r-pheatmap >=1.0.12
+    - r-rmarkdown >=2.25
 
 test:
   commands: