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add recipe for ice-cream (bioconda#43266)
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#!/bin/bash | ||
set -eu -o pipefail | ||
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mkdir -p ${PREFIX}/bin | ||
cp ICEcream.sh ${PREFIX}/bin/ICEcream.sh | ||
cp ICEfamily_refer/familytools/plotting_script.py ${PREFIX}/bin/plotting_script.py | ||
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chmod 0755 "${PREFIX}/bin/plotting_script.py" | ||
chmod 0755 "${PREFIX}/bin/ICEcream.sh" |
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{% set name = "ice-cream" %} | ||
{% set version = "1.10" %} | ||
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package: | ||
name: "{{ name|lower }}" | ||
version: '{{ version }}' | ||
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source: | ||
url: https://github.com/xinehc/ICEcream/archive/refs/tags/v{{ version }}.tar.gz | ||
sha256: bcbdf246da4e896c1a0050f95868f20200ace07b504e443c68e775edae03308c | ||
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build: | ||
noarch: generic | ||
number: 0 | ||
run_exports: | ||
- {{ pin_subpackage('ice-cream', max_pin='x') }} | ||
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requirements: | ||
run: | ||
- python >=3.6 | ||
- perl >=5.26 | ||
- prokka | ||
- biopython | ||
- aragorn | ||
- hmmer | ||
- vmatch | ||
- blast | ||
- prodigal | ||
- pandas | ||
- r-base >=4.2 | ||
- r-reshape2 | ||
- dna_features_viewer | ||
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test: | ||
commands: | ||
- plotting_script.py --help | ||
- ICEcream.sh --help | ||
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about: | ||
home: https://github.com/xinehc/ICEcream | ||
license: MIT | ||
license_family: MIT | ||
summary: 'ICEcream: Integrative and Conjugative Elements Classification and gRaphical gEne Arrangement Method' |