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add recipe for ice-cream (bioconda#43266)
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xinehc authored Sep 28, 2023
1 parent e97c962 commit 4eb575a
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9 changes: 9 additions & 0 deletions recipes/ice-cream/build.sh
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#!/bin/bash
set -eu -o pipefail

mkdir -p ${PREFIX}/bin
cp ICEcream.sh ${PREFIX}/bin/ICEcream.sh
cp ICEfamily_refer/familytools/plotting_script.py ${PREFIX}/bin/plotting_script.py

chmod 0755 "${PREFIX}/bin/plotting_script.py"
chmod 0755 "${PREFIX}/bin/ICEcream.sh"
43 changes: 43 additions & 0 deletions recipes/ice-cream/meta.yaml
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{% set name = "ice-cream" %}
{% set version = "1.10" %}

package:
name: "{{ name|lower }}"
version: '{{ version }}'

source:
url: https://github.com/xinehc/ICEcream/archive/refs/tags/v{{ version }}.tar.gz
sha256: bcbdf246da4e896c1a0050f95868f20200ace07b504e443c68e775edae03308c

build:
noarch: generic
number: 0
run_exports:
- {{ pin_subpackage('ice-cream', max_pin='x') }}

requirements:
run:
- python >=3.6
- perl >=5.26
- prokka
- biopython
- aragorn
- hmmer
- vmatch
- blast
- prodigal
- pandas
- r-base >=4.2
- r-reshape2
- dna_features_viewer

test:
commands:
- plotting_script.py --help
- ICEcream.sh --help

about:
home: https://github.com/xinehc/ICEcream
license: MIT
license_family: MIT
summary: 'ICEcream: Integrative and Conjugative Elements Classification and gRaphical gEne Arrangement Method'

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