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clean dependencies for liger (bioconda#46845)
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theAeon authored Mar 28, 2024
1 parent 05d3895 commit 475c345
Showing 1 changed file with 20 additions and 33 deletions.
53 changes: 20 additions & 33 deletions recipes/r-liger/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@ source:
sha256: a189285513e5a11d658056de55670fe877bcf2f52ce65837f9b8a4b3ff7bab2f

build:
number: 0
number: 1
script: R CMD INSTALL --build .
rpaths:
- lib/R/lib/
Expand All @@ -26,72 +26,58 @@ requirements:
- make
host:
- r-base
- r-fnn
- r-hmisc
- r-rann.l1
- r-rcpp >=0.12.10
- r-rcpparmadillo
- r-rcppprogress
- r-rtsne
- r-cowplot
- r-dosnow
- r-dplyr
- r-foreach
- r-ggplot2
- r-ggrepel
- r-ica
- r-irlba
- r-mclust
- r-patchwork
- r-doparallel
- r-uwot
- r-hdf5r
- r-plyr
- r-snow
- r-psych
- r-rcppeigen
- r-rann
- r-scattermore >=0.7
- r-circlize
- bioconductor-complexheatmap
- r-leidenalg >=1.1.1
- bioconductor-s4vectors
- r-cli
- r-rlang
- r-matrix
- r-lifecycle
- r-magrittr
- r-scales
- r-rcolorbrewer
- r-viridis
run:
- r-base
- r-fnn
- r-hmisc
- r-rann.l1
- r-rcpp >=0.12.10
- r-rcpparmadillo
- r-rcppprogress
- r-rtsne
- r-cowplot
- r-doparallel
- r-uwot
- r-hdf5r
- r-dosnow
- r-dplyr
- r-foreach
- r-ggplot2
- r-ggrepel
- r-ica
- r-irlba
- r-mclust
- r-patchwork
- r-plyr
- r-snow
- r-psych
- r-rcppeigen
- r-uwot
- r-hdf5r
- r-rann
- r-reticulate
- r-scattermore >=0.7
- openjdk >=6
- umap-learn
- r-circlize
- bioconductor-complexheatmap
- r-leidenalg >=1.1.1
- bioconductor-s4vectors

- r-cli
- r-rlang
- r-matrix
- r-lifecycle
- r-magrittr
- r-scales
- r-rcolorbrewer
- r-viridis
test:
commands:
- $R -e "library('rliger')"
Expand All @@ -111,6 +97,7 @@ about:

extra:
recipe-maintainers:
- theAeon
- raivivek
identifiers:
- doi:10.1016/j.cell.2019.05.006

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