fix config option in experiment

src/main/java/org/matsim/run/policies/OpenBerlinChoiceExperiment.java

@@ -56,7 +56,8 @@ public class OpenBerlinChoiceExperiment extends OpenBerlinScenario {
 	@CommandLine.Option(names = "--balanced-innovation", description = "Use balanced innovation selection", defaultValue = "false")
 	private boolean bi;
 
-	@CommandLine.Option(names = "--act-est", description = "Include estimation of activity utilities into score", defaultValue = "true")
+	@CommandLine.Option(names = "--no-act-est", description = "Include estimation of activity utilities into score", defaultValue = "true",
+			negatable = true)
 	private boolean actEst;
 
 	@CommandLine.Option(names = "--inv-beta", description = "Beta inv value for selection", defaultValue = "-1")
@@ -177,6 +178,8 @@ protected void prepareControler(Controler controler) {
 			if (actEst) {
 				log.info("Including activity estimation into score");
 				builder.withActivityEstimator(DefaultActivityEstimator.class);
+			} else {
+				log.info("No activity estimation for score");
 			}
 
 			if (ConfigUtils.hasModule(controler.getConfig(), AdvancedScoringConfigGroup.class)) {

src/main/python/choicemodels/estimate_biogeme_plan_choice.py

@@ -4,6 +4,7 @@
 import argparse
 import os
 
+import numpy as np
 import biogeme.biogeme as bio
 import biogeme.database as db
 import biogeme.models as models
@@ -62,6 +63,11 @@
 
     effort = {x: float(y) for x, y in args.effort}
     if effort:
+        # Nan values are estimated
+        for mode in effort:
+            if np.isnan(effort[mode]):
+                effort[mode] = Beta(f"BETA_DIST_{mode}", 0, None, None, ESTIMATE)
+
         print("Using time effort", effort)
 
     # Variables for constants