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This is a template for app developers with SeqAn3. You can easily clone this repository and modify the existing code to your needs. It provides the elementary set-up for all SeqAn3 applications.

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SeqAn3 App Template

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This is a template for app developers with SeqAn3. You can easily clone this repository and modify the existing code to your needs. It provides the elementary set-up for all SeqAn3 applications.

Instructions:

  1. clone this repository: git clone --recurse-submodules https://github.com/joergi-w/app-template.git
  2. create a build directory and visit it: mkdir build && cd build
  3. run cmake: cmake ../app-template
  4. run make
  5. run the tests: make test
  6. execute the app: ./my_app

Planned features are:

  • build the app with seqan3
  • cli tests (black box)
  • api tests (white box)
  • tutorials, usage instructions
  • api documentation
  • benchmarks for time, memory and disk space consumption
  • coverage tests: api
  • automated CD
  • automated CI

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This is a template for app developers with SeqAn3. You can easily clone this repository and modify the existing code to your needs. It provides the elementary set-up for all SeqAn3 applications.

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  • C++ 72.3%
  • CMake 27.7%