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Various fixes #2

Merged
merged 19 commits into from
Jun 2, 2024
Merged

Various fixes #2

merged 19 commits into from
Jun 2, 2024

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maehr
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@maehr maehr commented Jun 2, 2024

Pull request

Proposed changes

Types of changes

  • New feature (non-breaking change which adds functionality).
  • Enhancement (non-breaking change which enhances functionality)
  • Bug Fix (non-breaking change which fixes an issue).
  • Breaking change (fix or feature that would cause existing functionality to change).

Checklist

  • I have read the README document.
  • My change requires a change to the documentation.
  • I have updated the documentation accordingly.

Summary by CodeRabbit

  • Chores
    • Updated the build-deploy job operating system from ubuntu-latest to macos-latest.
    • Updated a hyperlink in the website configuration.
    • Changed the license to "Attribution-ShareAlike 4.0 International" and updated license terms.
    • Renamed a custom reference document and added a custom CSS style sheet for printing.
    • Refined the project description and modified scripts to exclude specific files from Prettier processing.
    • Introduced a guide on creating discrimination-free metadata in CITATION.cff.
    • Adjusted .gitignore and manuscript/.gitignore exclusions.

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Commits

Files that changed from the base of the PR and between 46d7cd5 and ef60bb8.

Walkthrough

The recent updates primarily enhance the build and deployment process, adjust licensing terms, refine project documentation, and improve metadata practices. Key changes include switching the build environment to macOS, updating license links and terms, refining the project's description and scripts in package.json, and enhancing the .gitignore configurations. Additionally, a new citation guide emphasizes FAIR principles for historical research data.

Changes

Files/Paths Change Summary
.github/workflows/... Switched build-deploy job OS from ubuntu-latest to macos-latest.
.github/_quarto.yml Updated hyperlink from LICENSE-CCBY.md to LICENSE-CCBYSA.md.
LICENSE-CCBYSA.md Changed license to "Attribution-ShareAlike 4.0 International" with updated terms and definitions.
README.md Renamed a custom reference document file and added a custom CSS style sheet for printing.
package.json Updated description and modified check and format scripts to exclude specific files.
CITATION.cff Added a guide on creating discrimination-free metadata for historical research data.
.gitignore Removed specific Quarto exclusions and adjusted example.env exclusion.
manuscript/.gitignore Added exclusion of the _manuscript/ directory for Quarto.

Poem

In code we weave, with changes bright,
From Ubuntu's shores to macOS's light.
Licenses shift, and terms align,
With FAIR principles, our data shines.
A guide to cite, with no disguise,
Our project soars, reaching the skies.
🐇✨


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Actionable comments posted: 0

Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

Commits

Files that changed from the base of the PR and between f1253df and e32e967.

Files selected for processing (3)
  • .github/workflows/quarto-publish.yml (1 hunks)
  • README.md (1 hunks)
  • manuscript/_quarto.yml (2 hunks)
Additional context used
LanguageTool
README.md

[uncategorized] ~15-~15: A comma may be missing after the conjunctive/linking adverb ‘Furthermore’.
Context: ...earch data. It is available in German. Furthermore this repository contains a mapping of t...


[uncategorized] ~26-~26: Loose punctuation mark.
Context: ...s organized as follows: - manuscript/: the manuscript of the publication - `ma...


[grammar] ~29-~29: Did you mean the formatting language “Markdown” (= proper noun)?
Context: ...cript/index.qmd: the main document, in markdown format - manuscript/custom-reference.d...


[style] ~55-~55: Consider replacing this word to strengthen your wording.
Context: ...map This handbook is a living document and will be updated regularly. We plan on r...


[style] ~55-~55: Try using a more formal synonym here to elevate your writing.
Context: ...ument and will be updated regularly. We plan on releasing a citable version of the handbook later...

Additional comments not posted (4)
manuscript/_quarto.yml (2)

9-12: Updated links in the code-links section.

Verification successful

The updated links in the code-links section are functional and lead to the correct resources.

  • https://github.com/maehr/diskriminierungsfreie-metadaten/discussions returns HTTP 200.
  • https://github.com/maehr/diskriminierungsfreie-metadaten returns HTTP 200.
Scripts executed

The following scripts were executed for the analysis:


Script:

#!/bin/bash
# Description: Verify that the new links are functional and lead to the correct resources.

# Test: Check the HTTP status of the new links. Expect: HTTP 200 OK.
curl -o /dev/null -s -w "%{http_code}\n" https://github.com/maehr/diskriminierungsfreie-metadaten/discussions
curl -o /dev/null -s -w "%{http_code}\n" https://github.com/maehr/diskriminierungsfreie-metadaten

Length of output: 219


23-23: Updated repository in the giscus comments section.

Verification successful

The repository maehr/diskriminierungsfreie-metadaten exists and has issues enabled, which is a requirement for giscus integration.

Scripts executed

The following scripts were executed for the analysis:


Script:

#!/bin/bash
# Description: Verify the integration of the new repository with the `giscus` comment system.

# Test: Check if the repository is correctly configured for `giscus` integration. Expect: Correct configuration settings.
gh api repos/maehr/diskriminierungsfreie-metadaten -q '.features'

Length of output: 66



Script:

#!/bin/bash
# Description: Verify the existence and configuration of the new repository for `giscus` integration.

# Check if the repository exists
repo_exists=$(gh api repos/maehr/diskriminierungsfreie-metadaten -q '.id' 2>/dev/null)

if [ -z "$repo_exists" ]; then
  echo "Repository does not exist."
else
  echo "Repository exists."
  # Check if the repository has issues enabled (a requirement for `giscus` integration)
  issues_enabled=$(gh api repos/maehr/diskriminierungsfreie-metadaten -q '.has_issues')
  if [ "$issues_enabled" = "true" ]; then
    echo "Issues are enabled."
  else
    echo "Issues are not enabled."
  fi
fi

Length of output: 316

.github/workflows/quarto-publish.yml (1)

15-15: Switched to macos-latest for the build-deploy job.

Verification successful

The initial attempt to verify the build process on macos-latest was unsuccessful due to a permissions issue. To proceed, we will:

  1. Check the workflow file for any macOS-specific steps or dependencies.
  2. Look for any recent successful runs of the workflow on GitHub Actions.

The recent runs of the quarto-publish.yml workflow show multiple successful executions, indicating that the switch to macos-latest is functioning correctly.

  • Successful runs:
    • 9337684984
    • 9337640777
    • 9337622358
    • 9337538869

This confirms that the build process on macos-latest is working as expected.

Scripts executed

The following scripts were executed for the analysis:


Script:

#!/bin/bash
# Description: Verify the build process on `macos-latest`.

# Test: Trigger a build and check for successful completion. Expect: Build completes without errors.
gh workflow run quarto-publish.yml --ref main

Length of output: 245



Script:

#!/bin/bash
# Check for macOS-specific steps or dependencies in the workflow file
grep -i 'macos' .github/workflows/quarto-publish.yml

# List recent runs of the workflow to check for successful executions
gh run list --workflow=quarto-publish.yml --limit=5

Length of output: 615

README.md (1)

30-31: Updated manuscript references and added a custom CSS stylesheet.

Verification successful

The references to custom-reference.docx and custom.css are correctly integrated in manuscript/_quarto.yml. Let's verify if these files exist in the manuscript directory.


The verification confirms that both custom-reference.docx and custom.css exist in the manuscript directory and are correctly referenced in manuscript/_quarto.yml.

  • manuscript/custom-reference.docx: a custom reference document for the manuscript
  • manuscript/custom.css: a custom CSS stylesheet for printing
Scripts executed

The following scripts were executed for the analysis:


Script:

#!/bin/bash
# Description: Verify the integration of the new reference document and CSS stylesheet.

# Test: Check if the new files are correctly referenced in the build process. Expect: Correct file paths and usage.
rg 'custom-reference.docx' manuscript/
rg 'custom.css' manuscript/

Length of output: 172



Script:

#!/bin/bash
# Description: Verify the existence of the new reference document and CSS stylesheet in the manuscript directory.

# Test: Check if the files exist in the manuscript directory. Expect: Files should be present.
test -f manuscript/custom-reference.docx && echo "custom-reference.docx exists" || echo "custom-reference.docx does not exist"
test -f manuscript/custom.css && echo "custom.css exists" || echo "custom.css does not exist"

Length of output: 186

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Actionable comments posted: 0

Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

Commits

Files that changed from the base of the PR and between e32e967 and 9cf0006.

Files selected for processing (1)
  • .github/workflows/quarto-publish.yml (2 hunks)
Files skipped from review as they are similar to previous changes (1)
  • .github/workflows/quarto-publish.yml

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Actionable comments posted: 0

Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

Commits

Files that changed from the base of the PR and between 9cf0006 and c7ea4e8.

Files selected for processing (1)
  • .github/workflows/quarto-publish.yml (2 hunks)
Files skipped from review as they are similar to previous changes (1)
  • .github/workflows/quarto-publish.yml

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Actionable comments posted: 0

Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

Commits

Files that changed from the base of the PR and between c7ea4e8 and 29b8865.

Files ignored due to path filters (1)
  • pnpm-lock.yaml is excluded by !pnpm-lock.yaml
Files selected for processing (4)
  • .github/_quarto.yml (1 hunks)
  • LICENSE-CCBYSA.md (8 hunks)
  • README.md (4 hunks)
  • package.json (2 hunks)
Files skipped from review due to trivial changes (1)
  • .github/_quarto.yml
Additional context used
LanguageTool
README.md

[uncategorized] ~15-~15: A comma may be missing after the conjunctive/linking adverb ‘Furthermore’.
Context: ...earch data. It is available in German. Furthermore this repository contains a mapping of t...


[uncategorized] ~26-~26: Loose punctuation mark.
Context: ...s organized as follows: - manuscript/: the manuscript of the publication - `ma...


[grammar] ~30-~30: Did you mean the formatting language “Markdown” (= proper noun)?
Context: ...e-metadaten.qmd: the main document, in markdown format - manuscript/custom-reference.d...


[style] ~56-~56: Consider replacing this word to strengthen your wording.
Context: ...map This handbook is a living document and will be updated regularly. The discussi...


[uncategorized] ~56-~56: Use a comma before ‘and’ if it connects two independent clauses (unless they are closely connected and short).
Context: ...sion of the handbook is open to everyone and we welcome feedback and suggestions for...

LICENSE-CCBYSA.md

[grammar] ~139-~139: Possible agreement error — use the base form here.
Context: ...rights anywhere in the world. m. You means the individual or entity exercising the...


[style] ~325-~325: Consider shortening this phrase to just ‘whether’, unless you mean ‘regardless of whether’.
Context: ..., OR THE PRESENCE OR ABSENCE OF ERRORS, WHETHER OR NOT KNOWN OR DISCOVERABLE. WHERE DISCL...

Markdownlint
LICENSE-CCBYSA.md

70-70: Expected: 1; Actual: 2
Multiple consecutive blank lines


142-142: Expected: 1; Actual: 2
Multiple consecutive blank lines


225-225: Expected: 1; Actual: 2
Multiple consecutive blank lines


292-292: Expected: 1; Actual: 2
Multiple consecutive blank lines


315-315: Expected: 1; Actual: 2
Multiple consecutive blank lines


344-344: Expected: 1; Actual: 2
Multiple consecutive blank lines


373-373: Expected: 1; Actual: 2
Multiple consecutive blank lines


383-383: Expected: 1; Actual: 2
Multiple consecutive blank lines


407-407: Expected: 1; Actual: 2
Multiple consecutive blank lines

Additional comments not posted (10)
package.json (4)

3-3: Updated description accurately reflects the project's focus.


8-8: Updated Prettier check script correctly excludes specified files.


10-10: Updated Prettier format script correctly excludes specified files.


20-20: Updated Prettier version to 3.3.0.

README.md (3)

9-9: Updated data license link to point to the correct license file.


31-31: Renamed custom reference document to custom-reference.docx.


32-32: Added custom CSS file for printing, enhancing the presentation of printed materials.

LICENSE-CCBYSA.md (3)

1-1: Updated license title to "Attribution-ShareAlike 4.0 International".


Line range hint 57-190: Added new definitions and conditions to the license to enhance clarity and legal accuracy.

Tools
LanguageTool

[grammar] ~139-~139: Possible agreement error — use the base form here.
Context: ...rights anywhere in the world. m. You means the individual or entity exercising the...

Markdownlint

142-142: Expected: 1; Actual: 2
Multiple consecutive blank lines


273-290: Enhanced ShareAlike conditions to ensure consistent application of sharing and adaptation rights.

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Actionable comments posted: 0

Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

Commits

Files that changed from the base of the PR and between 29b8865 and eb298fa.

Files selected for processing (2)
  • CITATION.cff (1 hunks)
  • README.md (4 hunks)
Additional context used
LanguageTool
README.md

[uncategorized] ~15-~15: A comma may be missing after the conjunctive/linking adverb ‘Furthermore’.
Context: ...earch data. It is available in German. Furthermore this repository contains a mapping of t...


[uncategorized] ~26-~26: Loose punctuation mark.
Context: ...s organized as follows: - manuscript/: the manuscript of the publication - `ma...


[grammar] ~30-~30: Did you mean the formatting language “Markdown” (= proper noun)?
Context: ...e-metadaten.qmd: the main document, in markdown format - manuscript/custom-reference.d...


[style] ~56-~56: Consider replacing this word to strengthen your wording.
Context: ...map This handbook is a living document and will be updated regularly. The discussi...


[uncategorized] ~56-~56: Use a comma before ‘and’ if it connects two independent clauses (unless they are closely connected and short).
Context: ...sion of the handbook is open to everyone and we welcome feedback and suggestions for...

Additional comments not posted (6)
CITATION.cff (1)

1-34: The CITATION.cff file appears correctly formatted and contains appropriate metadata for citing the project.

README.md (5)

9-9: The addition of the data license badge linking to LICENSE-CCBYSA.md aligns with the updated licensing information and provides clear visibility of the data license.


14-14: The updated description in the "What is the publication about?" section is comprehensive and clearly communicates the purpose and scope of the publication.


27-32: The updated repository structure is well-documented, providing clear paths and descriptions for each component of the repository.

Tools
LanguageTool

[grammar] ~30-~30: Did you mean the formatting language “Markdown” (= proper noun)?
Context: ...e-metadaten.qmd: the main document, in markdown format - manuscript/custom-reference.d...


32-32: The addition of custom.css for printing enhances the usability of the manuscript, allowing for better formatted print versions.


56-56: The clarification that the handbook is a "living document" is beneficial as it sets the expectation for ongoing updates and community involvement.

Tools
LanguageTool

[style] ~56-~56: Consider replacing this word to strengthen your wording.
Context: ...map This handbook is a living document and will be updated regularly. The discussi...


[uncategorized] ~56-~56: Use a comma before ‘and’ if it connects two independent clauses (unless they are closely connected and short).
Context: ...sion of the handbook is open to everyone and we welcome feedback and suggestions for...

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Actionable comments posted: 0

Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

Commits

Files that changed from the base of the PR and between eb298fa and 46d7cd5.

Files ignored due to path filters (1)
  • manuscript/custom-reference.docx is excluded by !**/*.docx
Files selected for processing (3)
  • .github/workflows/quarto-publish.yml (2 hunks)
  • .gitignore (1 hunks)
  • manuscript/.gitignore (1 hunks)
Files skipped from review due to trivial changes (2)
  • .gitignore
  • manuscript/.gitignore
Files skipped from review as they are similar to previous changes (1)
  • .github/workflows/quarto-publish.yml

@maehr maehr merged commit 2204a3d into main Jun 2, 2024
2 checks passed
@maehr maehr deleted the fixes branch June 2, 2024 23:02
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