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TST Fix testing & update version matrix
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- Use the right version of Python in the conda environment
- Include newer Python & NumPy versions
- Use right shell for tests
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luispedro committed Oct 14, 2021
1 parent fc690c2 commit cf9bc17
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33 changes: 0 additions & 33 deletions .github/workflows/python-package-conda.yml

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50 changes: 50 additions & 0 deletions .github/workflows/test-python-package-with-conda.yml
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name: Test mahotas

on: [push]

jobs:
build-linux:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ['3.6', '3.7', '3.8', '3.9']
numpy-version: ['1.17', '1.18', '1.19', '1.20', '1.21']
exclude:
# 3.6 is too old for NumPy 1.20/1.21
- python-version: '3.6'
numpy-version: '1.20'
- python-version: '3.6'
numpy-version: '1.21'

# NumPy 1.17/1.18 are too old for Python 3.9
- python-version: '3.9'
numpy-version: '1.17'
- python-version: '3.9'
numpy-version: '1.18'
max-parallel: 5

steps:
- uses: actions/checkout@v2
- uses: conda-incubator/setup-miniconda@v2
with:
activate-environment: mahotas_test_env
python-version: ${{ matrix.python-version }}
auto-activate-base: false
- name: Add conda to system path
run: |
# $CONDA is an environment variable pointing to the root of the miniconda directory
echo $CONDA/bin >> $GITHUB_PATH
- name: Install dependencies
run: |
conda install --name mahotas_test_env python=${{ matrix.python-version }} numpy=${{ matrix.numpy-version }}
conda install --file tests-requirements.txt --name mahotas_test_env
- name: Build
shell: bash -l {0}
run: |
conda activate mahotas_test_env
make debug
- name: Test with pytest
shell: bash -l {0}
run: |
conda activate mahotas_test_env
python -m pytest -v

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