plot editor

metabolabpy/__init__.py

@@ -1,4 +1,4 @@
 __author__ = 'Christian Ludwig ([email protected])'
 __credits__ = 'Christian Ludwig ([email protected])'
-__version__ = '0.9.20'
+__version__ = '0.9.21'
 __license__ = 'GPLv3'

metabolabpy/nmr/nmrConfig.py

@@ -37,6 +37,7 @@ def __init__(self):
         self.print_standard_colours = True
         self.print_stacked_plot = False
         self.print_auto_scale = False
+        self.print_stacked_plot_repeat_axes = False
         self.print_spc_linewidth = 2
         self.print_axes_linewidth = 2
         self.print_ticks_font_size = 10
@@ -55,6 +56,7 @@ def make_config(self):
         print_dataset_colours = 'yes' if self.print_dataset_colours is True else 'no'
         print_standard_colours = 'yes' if self.print_standard_colours is True else 'no'
         print_stacked_plot = 'yes' if self.print_stacked_plot is True else 'no'
+        print_stacked_plot_repeat_axes = 'yes' if self.print_stacked_plot is True else 'no'
         print_auto_scale = 'yes' if self.print_auto_scale is True else 'no'
         config['GUI'] = {'auto_plot': auto_plot,
                          'keep_zoom': keep_zoom,
@@ -87,6 +89,7 @@ def make_config(self):
                            'print_ticks_font_size': self.print_ticks_font_size,
                            'print_label_font_size': self.print_label_font_size,
                            'print_stacked_plot': print_stacked_plot,
+                           'print_stacked_plot_repeat_axes': print_stacked_plot_repeat_axes,
                            'print_auto_scale': print_auto_scale}
         return config
 
@@ -157,6 +160,9 @@ def set_print_standard_colours(self, value):
     def set_print_stacked_plot(self, value):
         self.print_stacked_plot = True if value == "yes" else False
 
+    def set_print_stacked_plot_repeat_axes(self, value):
+        self.print_stacked_plotrepeat_axes = True if value == "yes" else False
+
     def set_print_auto_scale(self, value):
         self.print_auto_scale = True if value == "yes" else False
 

metabolabpy/nmr/nmrDataSet.py

@@ -72,6 +72,7 @@ def __init__(self):
         self.int1 = 0.0
         self.int2 = 0.0
         self.int3 = 0.0
+        self.int4 = 0.0
         self.print_colours = []
         self.print_neg_colours = []
         self.background_colour = []
@@ -812,18 +813,21 @@ def init_print_colours(self):
             self.int1 = 1.0
             self.int2 = 0.6
             self.int3 = 0.3
+            self.int4 = 0.8
         else:
             self.int1 = 0.4
             self.int2 = 0.8
             self.int3 = 0.5
+            self.int4 = 0.1
 
         int1 = self.int1
         int2 = self.int2
         int3 = self.int3
+        int4 = self.int4
         light_neg_diff = 0.5
         dark_neg_diff = 0.2
         if self.cf.print_light_mode == False:
-            self.print_colours = [(int1, int1, 0.0),
+            self.print_colours = [(int4, int4, int1),
                                  (0.0, int1, int1),
                                  (int1, 0.0, int1),
                                  (int2, int2, int1),
@@ -842,7 +846,7 @@ def init_print_colours(self):
             int1 = max(int1, 0.0)
             int2 = max(int2, 0.0)
             int3 = max(int3, 0.0)
-            self.print_neg_colours = [(int1, int1, 0.0),
+            self.print_neg_colours = [(int2, int2, int1),
                                  (0.0, int1, int1),
                                  (int1, 0.0, int1),
                                  (int2, int2, int1),