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Upload unit test data in HiPSCat format #3

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2 changes: 2 additions & 0 deletions .gitignore
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Expand Up @@ -148,3 +148,5 @@ _html/

# Project initialization script
.initialize_new_project.sh

.idea/
2 changes: 2 additions & 0 deletions requirements.txt
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git+https://github.com/astronomy-commons/lsdb.git@main
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git+https://github.com/lincc-frameworks-mask-incubator/gundam.git@main
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{
"catalog_name": "DATA",
"catalog_type": "object",
"total_rows": 84383,
"epoch": "J2000",
"ra_column": "ra",
"dec_column": "dec"
}
8 changes: 8 additions & 0 deletions tests/data/DATA/partition_info.csv
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Norder,Dir,Npix,num_rows
0,0,1,23743
0,0,2,34965
0,0,5,632
0,0,6,21350
0,0,7,3481
0,0,9,3
0,0,10,209
25 changes: 25 additions & 0 deletions tests/data/DATA/provenance_info.json
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{
"catalog_name": "DATA",
"catalog_type": "object",
"total_rows": 84383,
"epoch": "J2000",
"ra_column": "ra",
"dec_column": "dec",
"version": "0.3.4",
"generation_date": "2024.06.13",
"tool_args": {
"tool_name": "lsdb",
"version": "0.2.5",
"runtime_args": {
"catalog_name": "DATA",
"output_path": "DATA",
"output_catalog_name": "DATA",
"catalog_path": "DATA",
"catalog_type": "object",
"total_rows": 84383,
"epoch": "J2000",
"ra_column": "ra",
"dec_column": "dec"
}
}
}
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8 changes: 8 additions & 0 deletions tests/data/DR7-lrg-rand/catalog_info.json
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{
"catalog_name": "DR7-lrg-rand",
"catalog_type": "object",
"total_rows": 832474,
"epoch": "J2000",
"ra_column": "ra",
"dec_column": "dec"
}
22 changes: 22 additions & 0 deletions tests/data/DR7-lrg-rand/partition_info.csv
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Norder,Dir,Npix,num_rows
0,0,0,1362
1,0,4,87864
1,0,5,90690
1,0,6,32248
1,0,7,33718
1,0,8,90367
1,0,9,57506
1,0,10,90376
1,0,11,35271
0,0,3,3655
0,0,4,54658
0,0,5,11292
1,0,24,1720
1,0,25,60046
1,0,26,51279
1,0,27,90066
0,0,7,30562
0,0,8,4775
0,0,9,78
0,0,10,1062
0,0,11,3879
25 changes: 25 additions & 0 deletions tests/data/DR7-lrg-rand/provenance_info.json
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{
"catalog_name": "DR7-lrg-rand",
"catalog_type": "object",
"total_rows": 832474,
"epoch": "J2000",
"ra_column": "ra",
"dec_column": "dec",
"version": "0.3.4",
"generation_date": "2024.06.13",
"tool_args": {
"tool_name": "lsdb",
"version": "0.2.5",
"runtime_args": {
"catalog_name": "DR7-lrg-rand",
"output_path": "DR7-lrg-rand",
"output_catalog_name": "DR7-lrg-rand",
"catalog_path": "DR7-lrg-rand",
"catalog_type": "object",
"total_rows": 832474,
"epoch": "J2000",
"ra_column": "ra",
"dec_column": "dec"
}
}
}
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8 changes: 8 additions & 0 deletions tests/data/DR7-lrg/catalog_info.json
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{
"catalog_name": "DR7-lrg",
"catalog_type": "object",
"total_rows": 105831,
"epoch": "J2000",
"ra_column": "ra",
"dec_column": "dec"
}
13 changes: 13 additions & 0 deletions tests/data/DR7-lrg/partition_info.csv
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Norder,Dir,Npix,num_rows
0,0,0,176
0,0,1,31379
0,0,2,35044
0,0,3,420
0,0,4,6692
0,0,5,1330
0,0,6,25672
0,0,7,4049
0,0,8,523
0,0,9,7
0,0,10,111
0,0,11,428
25 changes: 25 additions & 0 deletions tests/data/DR7-lrg/provenance_info.json
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{
"catalog_name": "DR7-lrg",
"catalog_type": "object",
"total_rows": 105831,
"epoch": "J2000",
"ra_column": "ra",
"dec_column": "dec",
"version": "0.3.4",
"generation_date": "2024.06.13",
"tool_args": {
"tool_name": "lsdb",
"version": "0.2.5",
"runtime_args": {
"catalog_name": "DR7-lrg",
"output_path": "DR7-lrg",
"output_catalog_name": "DR7-lrg",
"catalog_path": "DR7-lrg",
"catalog_type": "object",
"total_rows": 105831,
"epoch": "J2000",
"ra_column": "ra",
"dec_column": "dec"
}
}
}
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8 changes: 8 additions & 0 deletions tests/data/RAND/catalog_info.json
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{
"catalog_name": "RAND",
"catalog_type": "object",
"total_rows": 227336,
"epoch": "J2000",
"ra_column": "ra",
"dec_column": "dec"
}
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Norder,Dir,Npix,num_rows
0,0,1,73222
0,0,2,82167
0,0,5,1742
0,0,6,60914
0,0,7,8953
0,0,9,17
0,0,10,321
25 changes: 25 additions & 0 deletions tests/data/RAND/provenance_info.json
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{
"catalog_name": "RAND",
"catalog_type": "object",
"total_rows": 227336,
"epoch": "J2000",
"ra_column": "ra",
"dec_column": "dec",
"version": "0.3.4",
"generation_date": "2024.06.13",
"tool_args": {
"tool_name": "lsdb",
"version": "0.2.5",
"runtime_args": {
"catalog_name": "RAND",
"output_path": "RAND",
"output_catalog_name": "RAND",
"catalog_path": "RAND",
"catalog_type": "object",
"total_rows": 227336,
"epoch": "J2000",
"ra_column": "ra",
"dec_column": "dec"
}
}
}
93 changes: 93 additions & 0 deletions tests/data/generate_data.ipynb
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{
"cells": [
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## Unit test data\n",
"\n",
"This directory contains very small, toy, data sets that are used for unit tests."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"import lsdb\n",
"from astropy.table import Table\n",
"\n",
"\n",
"def construct_df_from_fits(file_path):\n",
" dat = Table.read(file_path, format=\"fits\")\n",
" return dat.to_pandas()\n",
"\n",
"\n",
"def generate_catalog(catalog_name):\n",
" raw_fits = f\"./raw/{catalog_name}.fits\"\n",
" catalog = lsdb.from_dataframe(\n",
" construct_df_from_fits(raw_fits),\n",
" catalog_name=catalog_name,\n",
" catalog_type=\"object\",\n",
" )\n",
" catalog.to_hipscat(catalog_name)"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## Galaxy samples"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"generate_catalog(\"DATA\")\n",
"generate_catalog(\"DR7-lrg\")"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## Random samples"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"generate_catalog(\"RAND\")\n",
"generate_catalog(\"DR7-lrg-rand\")"
]
}
],
"metadata": {
"kernelspec": {
"display_name": "corrgi",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.11.9"
}
},
"nbformat": 4,
"nbformat_minor": 2
}
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