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49 Open 67 Closed
49 Open 67 Closed
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Issues list

Some questions about SV calling
#120 opened Dec 13, 2024 by HuangYihang1222
Minigraph does not find variants in simulated data
#119 opened Nov 29, 2024 by agolicz
1
Simulating with a small sample
#118 opened Nov 27, 2024 by jp-jong
Low accuracy on simulated reads and overlapping primary alignments question Further information is requested
#115 opened Oct 14, 2024 by xchang1
3
Add SN tag (or equivalent) for L lines
#114 opened Oct 8, 2024 by hugocarmaga
Node with no coverage (dc) on its own rank
#113 opened Jul 10, 2024 by jp-jong
Illegal instruction
#110 opened Mar 13, 2024 by Mar10L
2
feature requests for output VCF
#109 opened Feb 1, 2024 by zeeev
1
minigraph - stable fa - shot sequences
#104 opened Oct 27, 2023 by bioteksampath
Valid paths in a GFA don't have end-to-end alignments
#103 opened Sep 13, 2023 by rlorigro
1
comparing --call output bed files with gfa file
#102 opened Aug 11, 2023 by suyeonwy
Masking regions for chaining?
#100 opened Jun 30, 2023 by rlorigro
running minigraph
#98 opened Jun 8, 2023 by Gon1976
1
final link failed: Nonrepresentable section on output
#96 opened May 30, 2023 by jingydz
some warnings while generating a genome graph
#94 opened Mar 31, 2023 by hxt163
Empty alignment gaf output
#93 opened Mar 3, 2023 by abanerjee10
4
Incorrect path alignment
#91 opened Feb 17, 2023 by tobiasrausch
size difference when reciprocal minigraphing
#90 opened Feb 13, 2023 by cistarsa
Classification of structural variants
#89 opened Feb 1, 2023 by ValentinaPeona
Annotation of rGFA
#88 opened Feb 1, 2023 by gsc74
Mappings not full-length, alignment extension problem?
#86 opened Jan 25, 2023 by tobiasrausch
Comparing minigraph and Dipcall
#85 opened Dec 26, 2022 by cjain7
1
conversion to stableGaf incorrectly assigns forward orientation
#83 opened Nov 15, 2022 by tobiasrausch
1
sequence to graph mapping didn't work neither
#82 opened Nov 4, 2022 by lingliao
1
Segmentation fault (core dumped) while generaing a genome graph
#81 opened Nov 2, 2022 by lingliao
4
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