v2.0.7.9047

- fix: Update shinyalalert for HOBO reformat, Issue \#164 - Shiny removes empty directories, add ‘remove.text’ file before upload
leppott · Dec 27, 2024 · 638f5f5 · 638f5f5
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: ContDataQC
 Title: Quality Control (QC) of Continous Monitoring Data
-Version: 2.0.7.9046
+Version: 2.0.7.9047
 Authors@R: c(
 	person("Erik W", "Leppo", email="[email protected]",role=c("aut","cre")),
 	person("Ann","Roseberry Lincoln", role="ctb"),

diff --git a/NEWS b/NEWS
@@ -3,15 +3,24 @@ NEWS-ContDataQC
 
 <!-- NEWS.md is generated from NEWS.Rmd. Please edit that file -->
 
-    #> Last Update: 2024-12-26 13:39:53.643252
+    #> Last Update: 2024-12-27 08:13:47.849707
 
 # Version History
 
+## v2.0.7.9047
+
+2024-12-27
+
+- fix: Update shinyalalert for HOBO reformat, Issue \#164
+  - Shiny removes empty directories, add ‘remove.text’ file before
+    upload
+
 ## v2.0.7.9046
 
 2024-12-26
 
-- fix: Update shinyalert for HOBO reformat for multiple files
+- fix: Update shinyalert for HOBO reformat for multiple files, Issue
+  \#164
 
 ## v2.0.7.9045
 
@@ -84,7 +93,8 @@ NEWS-ContDataQC
 
 2024-11-04
 
-- refactor: Add pop up on HOBOware reformat for date time conversion
+- refactor: Add pop up on HOBOware reformat for date time conversion,
+  Issue \#164
   - Success and failure
 
 ## v2.0.7.9034

diff --git a/NEWS.md b/NEWS.md
@@ -3,15 +3,24 @@ NEWS-ContDataQC
 
 <!-- NEWS.md is generated from NEWS.Rmd. Please edit that file -->
 
-    #> Last Update: 2024-12-26 13:39:53.643252
+    #> Last Update: 2024-12-27 08:13:47.849707
 
 # Version History
 
+## v2.0.7.9047
+
+2024-12-27
+
+- fix: Update shinyalalert for HOBO reformat, Issue \#164
+  - Shiny removes empty directories, add ‘remove.text’ file before
+    upload
+
 ## v2.0.7.9046
 
 2024-12-26
 
-- fix: Update shinyalert for HOBO reformat for multiple files
+- fix: Update shinyalert for HOBO reformat for multiple files, Issue
+  \#164
 
 ## v2.0.7.9045
 
@@ -84,7 +93,8 @@ NEWS-ContDataQC
 
 2024-11-04
 
-- refactor: Add pop up on HOBOware reformat for date time conversion
+- refactor: Add pop up on HOBOware reformat for date time conversion,
+  Issue \#164
   - Success and failure
 
 ## v2.0.7.9034

diff --git a/NEWS.rmd b/NEWS.rmd
@@ -21,10 +21,18 @@ cat(paste0("Last Update: ",Sys.time()))
 
 # Version History
 
+## v2.0.7.9047
+2024-12-27
+
+* fix: Update shinyalalert for HOBO reformat, Issue #164
+    + Shiny removes empty directories, add 'remove.text' file before upload
+* tests: Add code to library creation script to add temp file to HOBO folder
+    + Avoid having empty directory removed during upload to ShinyApps.io
+
 ## v2.0.7.9046
 2024-12-26
 
-* fix: Update shinyalert for HOBO reformat for multiple files
+* fix: Update shinyalert for HOBO reformat for multiple files, Issue #164
 
 ## v2.0.7.9045
 2024-12-26
@@ -85,7 +93,7 @@ cat(paste0("Last Update: ",Sys.time()))
 ## v2.0.7.9035
 2024-11-04
 
-* refactor: Add pop up on HOBOware reformat for date time conversion
+* refactor: Add pop up on HOBOware reformat for date time conversion, Issue #164
     + Success and failure
 
 ## v2.0.7.9034

diff --git a/inst/extdata/ContDataQC_LibraryCreation.Rmd b/inst/extdata/ContDataQC_LibraryCreation.Rmd
@@ -101,6 +101,12 @@ fn_copy    <- "remove.txt"
 path_from  <- file.path(path_shiny, "external", fn_copy)
 path_to    <- file.path(path_shiny, "data", fn_copy)
 file.copy(path_from, path_to)
+# also HOBO folder
+file.remove(list.files(file.path(path_shiny, "HOBO"),
+                       full.names = TRUE,
+                       include.dirs = TRUE,
+                       recursive = TRUE))
+file.copy(path_from, file.path(path_shiny, "HOBO", fn_copy))
 
 # NEWS
 # Render then Copy NEWS so picked up in help

diff --git a/inst/extdata/ContDataQC_LibraryCreation.nb.html b/inst/extdata/ContDataQC_LibraryCreation.nb.html
diff --git a/inst/shiny-examples/ContDataQC/HOBO/ECO66G20_AW_20140728_20141013.csv b/inst/shiny-examples/ContDataQC/HOBO/ECO66G20_AW_20140728_20141013.csv
diff --git a/inst/shiny-examples/ContDataQC/HOBO/ECO66G20_AW_20141013_20150316.csv b/inst/shiny-examples/ContDataQC/HOBO/ECO66G20_AW_20141013_20150316.csv
diff --git a/inst/shiny-examples/ContDataQC/HOBO/remove.txt b/inst/shiny-examples/ContDataQC/HOBO/remove.txt
diff --git a/inst/shiny-examples/ContDataQC/global.R b/inst/shiny-examples/ContDataQC/global.R
@@ -23,7 +23,7 @@ library(shinyalert)
 # Sys.setenv(PATH = paste(Sys.getenv("PATH"), "C:\\Rtools\\bin", sep = ";"))
 
 # Version Number
-version <- "2.0.7.9046"
+version <- "2.0.7.9047"
 
 #Maximum individual file size that can be uploaded is 70 MB
 options(shiny.maxRequestSize = 70 * 1024^2)

diff --git a/inst/shiny-examples/ContDataQC/ui.R b/inst/shiny-examples/ContDataQC/ui.R