Source Extractor reference update

analysis/datacollect/datacollect.R

@@ -6,10 +6,10 @@
 set.seed(3125)
 
 # definitions
-files = c(  "SExtractor default"="../../source_extraction/sex_default/stats_sex_default.csv"
-            ,"SExtractor modified"="../../source_extraction/sex_optimised/stats_sex_optimised.csv"
-            ,"SExtractor w. dilated masks"="../../source_extraction/sex_dilated/stats_sex_dilated.csv"
-            ,"SExtractor w. modelled masks"="../../source_extraction/sex_modelled/stats_sex_modelled.csv"
+files = c(  "Source Extractor default"="../../source_extraction/sex_default/stats_sex_default.csv"
+            ,"Source Extractor modified"="../../source_extraction/sex_optimised/stats_sex_optimised.csv"
+            ,"Source Extractor w. dilated masks"="../../source_extraction/sex_dilated/stats_sex_dilated.csv"
+            ,"Source Extractor w. modelled masks"="../../source_extraction/sex_modelled/stats_sex_modelled.csv"
             ,"Gnuastro default"="../../source_extraction/gnuastro_default/stats_gnuastro_default.csv"
             ,"Gnuastro modified"="../../source_extraction/gnuastro_optimised/stats_gnuastro_optimised.csv"
             ,"Gnuastro w. dilated masks"="../../source_extraction/gnuastro_dilated/stats_gnuastro_dilated.csv"

analysis/lumfrac/lumfrac.R

@@ -68,7 +68,7 @@ for(j in 1:ncol(lfA)){
 par("xpd"=NA)
 mtext(side=1, line=2.5, text=bquote(paste("median recovered luminosity fraction: f = median(", L["out"], " / ", L["in"], ")")), outer=T)
 mtext(side=2, line=2, text=bquote(paste(f[25])), outer=T, las=1)
-alegend("top", legend=names(dat$files), ncol=4, byrow=T, inset=0.5, outer=TRUE, seg.len=0.8, seg.gap=0.4,  type=setNames(apply(cbind(pch=metpch,lwd=lwd,col=metcol,cex=cex), 1, as.list), rep("p",length(dat$files))), bty="o", cex=1, box.pad=0.25, line.spacing=1.15)
+alegend("top", legend=names(dat$files), ncol=4, byrow=T, inset=0.5, outer=TRUE, seg.len=0.8, seg.gap=0.4,  type=setNames(apply(cbind(pch=metpch,lwd=lwd,col=metcol,cex=cex), 1, as.list), rep("p",length(dat$files))), bty="o", cex=0.9, box.pad=0.25, line.spacing=1.15)
 
 # finish up
 graphics.off()

analysis/maskstamps/mkmodmask.R

@@ -17,7 +17,7 @@ xcen = 370
 ycen = 2650
 xdim = 535
 ydim = 535
-codebase = "sex"
+codebase = "gnuastro"
 simzipped = paste0("../../sims/simdat/v5/calexp-HSC-R-8283-38.simulated-n4-a.fits.fz")
 defmapzipped = paste0("../../source_extraction/",codebase,"_default/map/denlo4a.map.fits.gz")
 model0zipped = paste0("../../source_extraction/",codebase,"_modelled/model/denlo4a.model0.fits.fz")
@@ -122,7 +122,7 @@ layout(rbind(c(1,2),c(3,4)))
 line = 0.25
 
 aimage(model0dat, col.map=colmap, scale.type=ztype, axes=FALSE, scale.lo=zlo, scale.hi=zhi, xlab="", ylab="", smooth.fwhm=0)
-mtext(side=3, line=line, text="SExtractor model image")
+mtext(side=3, line=line, text="Source Extractor model image")
 mtext(side=2, line=line, text="standard stretch")
 
 aimage(model1dat, col.map=colmap, scale.type=ztype, axes=FALSE, scale.lo=zlo, scale.hi=zhi, xlab="", ylab="", smooth.fwhm=0)

analysis/ndetnmatch/ndetnmatch.R

@@ -107,7 +107,7 @@ for(i in 1:length(xdats)){
     mtext(side=1, line=2, text=alabs[i], outer=T)
     mtext(side=2, line=2.5, text=bquote(paste("number of matched objects")), outer=T)
     #mtext(side=3, line=1.5, text=simsources[i], outer=T)
-    alegend("top", legend=names(dat$files), ncol=4, byrow=T, inset=0.5, outer=TRUE, seg.len=0.8, seg.gap=0.4,  type=setNames(apply(cbind(pch=metpch,lwd=lwd,col=metcol,cex=cex), 1, as.list), rep("p",length(dat$files))), bty="o", cex=0.9, box.pad=0.25, line.spacing=1.25)
+    alegend("top", legend=names(dat$files), ncol=4, byrow=T, inset=0.5, outer=TRUE, seg.len=0.8, seg.gap=0.4,  type=setNames(apply(cbind(pch=metpch,lwd=lwd,col=metcol,cex=cex), 1, as.list), rep("p",length(dat$files))), bty="o", cex=0.8, box.pad=0.25, line.spacing=1.25)
 
     # finish up
     graphics.off()

analysis/skymaps/mkskymaps.R

@@ -101,10 +101,10 @@ xat = -0.02
 ysex = 0.773 #; abline(h=ysex)
 ygnu = 0.365 #; abline(h=ygnu)
 ydm = 0.061 #; abline(h=ydm)
-mtext(side=2, line=xlabline, at=ysex, text="SExtractor", cex=cex)
-arrows(x0=xat, y0=ysex+0.05, y1=ysex+0.185, length=arrowlength, angle=90, code=2, lend=1)
-arrows(x0=xat, y0=ysex-0.05, y1=ysex-0.185, length=arrowlength, angle=90, code=2, lend=1)
-lines(x=c(xat,xat), y=c(ysex-0.05,ysex-0.15))
+mtext(side=2, line=xlabline, at=ysex, text="Source Extractor", cex=cex)
+arrows(x0=xat, y0=ysex+0.08, y1=ysex+0.185, length=arrowlength, angle=90, code=2, lend=1)
+arrows(x0=xat, y0=ysex-0.08, y1=ysex-0.185, length=arrowlength, angle=90, code=2, lend=1)
+#lines(x=c(xat,xat), y=c(ysex-0.05,ysex-0.15))
 mtext(side=2, line=xlabline, at=ygnu, text="Gnuastro", cex=cex)
 arrows(x0=xat, y0=ygnu+0.05, y1=ygnu+0.185, length=arrowlength, angle=90, code=2, lend=1)
 arrows(x0=xat, y0=ygnu-0.05, y1=ygnu-0.185, length=arrowlength, angle=90, code=2, lend=1)

analysis/skyval/results.tex

@@ -1,10 +1,10 @@
     \multicolumn{1}{r}{label :} & \multicolumn{1}{c}{(denlo1a)} & \multicolumn{1}{c}{(denlo4a)} & \multicolumn{1}{c}{(denhi1a)} & \multicolumn{1}{c}{(denhi4a)} & \multicolumn{1}{c}{(denlo1b)} & \multicolumn{1}{c}{(denlo4b)} & \multicolumn{1}{c}{(denhi1b)} & \multicolumn{1}{c}{(denhi4b)}\\
     \hline
     \SExtractor & & & & & & & & \\
-    \hspace{25pt}default & $13.9\pm3.1$ & $16.7\pm5.7$ & $20.7\pm3.3$ & $25.4\pm6.8$ & $3.6\pm2.8$ & $5.7\pm5.6$ & $6.0\pm3.1$ & $9.9\pm6.9$\\
-    \hspace{25pt}modified & $14.0\pm1.7$ & $16.5\pm2.2$ & $20.9\pm1.4$ & $24.9\pm2.5$ & $3.6\pm1.1$ & $5.6\pm1.8$ & $6.1\pm1.4$ & $9.6\pm2.7$\\
-    \hspace{25pt}w. dilated masks & $10.5\pm2.1$ & $13.8\pm3.2$ & $16.0\pm2.3$ & $20.8\pm3.3$ & $0.9\pm1.8$ & $3.2\pm2.8$ & $1.7\pm1.8$ & $5.4\pm3.3$\\
-    \hspace{25pt}w. modelled masks & $8.4\pm2.6$ & $8.7\pm3.5$ & $12.5\pm3.3$ & $12.5\pm4.5$ & $-1.0\pm2.3$ & $-1.7\pm3.3$ & $-1.3\pm2.6$ & $-2.4\pm4.2$\\
+    \hspace{25pt}NA & $13.9\pm3.1$ & $16.7\pm5.7$ & $20.7\pm3.3$ & $25.4\pm6.8$ & $3.6\pm2.8$ & $5.7\pm5.6$ & $6.0\pm3.1$ & $9.9\pm6.9$\\
+    \hspace{25pt}NA & $14.0\pm1.7$ & $16.5\pm2.2$ & $20.9\pm1.4$ & $24.9\pm2.5$ & $3.6\pm1.1$ & $5.6\pm1.8$ & $6.1\pm1.4$ & $9.6\pm2.7$\\
+    \hspace{25pt}NA & $10.5\pm2.1$ & $13.8\pm3.2$ & $16.0\pm2.3$ & $20.8\pm3.3$ & $0.9\pm1.8$ & $3.2\pm2.8$ & $1.7\pm1.8$ & $5.4\pm3.3$\\
+    \hspace{25pt}NA & $8.4\pm2.6$ & $8.7\pm3.5$ & $12.5\pm3.3$ & $12.5\pm4.5$ & $-1.0\pm2.3$ & $-1.7\pm3.3$ & $-1.3\pm2.6$ & $-2.4\pm4.2$\\
     \hline
     \Gnuastro & & & & & & & & \\
     \hspace{25pt}default & $8.3\pm1.7$ & $11.6\pm2.1$ & $11.9\pm1.8$ & $15.8\pm2.3$ & $-0.0\pm1.2$ & $2.1\pm1.9$ & $-0.1\pm1.3$ & $2.9\pm2.0$\\

analysis/skyval/skyval.R

@@ -85,7 +85,7 @@ for(i in 1:length(datmeans)){
     #mtext(side=1, line=2, text="sky estimation method", outer=T)
     #mtext(side=3, line=1, text=simsources[i], outer=T)
     mtext(side=2, line=2.5, text=bquote(paste("mean estimated sky level / mag ", arcsec^{-2})), outer=T)
-    alegend("bottom", legend=names(dat$files), ncol=4, byrow=T, inset=0.5, outer=TRUE, seg.len=0.8, seg.gap=0.4,  type=setNames(apply(cbind(pch=metpch,lwd=lwd,col=metcol,cex=cex), 1, as.list), rep("p",length(dat$files))), bty="o", cex=0.9, box.pad=0.25, line.spacing=1.25)
+    alegend("bottom", legend=names(dat$files), ncol=4, byrow=T, inset=0.5, outer=TRUE, seg.len=0.8, seg.gap=0.4,  type=setNames(apply(cbind(pch=metpch,lwd=lwd,col=metcol,cex=cex), 1, as.list), rep("p",length(dat$files))), bty="o", cex=0.8, box.pad=0.25, line.spacing=1.25)
 
     # finish up
     graphics.off()