🗑️ Deprecate from_public

lnschema_core/models.py

@@ -366,7 +366,7 @@ def add_synonym(
 
         Examples:
             >>> import bionty as bt
-            >>> bt.CellType.from_public(name="T cell").save()
+            >>> bt.CellType.from_source(name="T cell").save()
             >>> lookup = bt.CellType.lookup()
             >>> record = lookup.t_cell
             >>> record.synonyms
@@ -389,7 +389,7 @@ def remove_synonym(self, synonym: str | ListLike):
 
         Examples:
             >>> import bionty as bt
-            >>> bt.CellType.from_public(name="T cell").save()
+            >>> bt.CellType.from_source(name="T cell").save()
             >>> lookup = bt.CellType.lookup()
             >>> record = lookup.t_cell
             >>> record.synonyms
@@ -411,7 +411,7 @@ def set_abbr(self, value: str):
 
         Examples:
             >>> import bionty as bt
-            >>> bt.ExperimentalFactor.from_public(name="single-cell RNA sequencing").save()
+            >>> bt.ExperimentalFactor.from_source(name="single-cell RNA sequencing").save()
             >>> scrna = bt.ExperimentalFactor.filter(name="single-cell RNA sequencing").one()
             >>> scrna.abbr
             None
@@ -454,7 +454,7 @@ def view_parents(
 
         Examples:
             >>> import bionty as bt
-            >>> bt.Tissue.from_public(name="subsegmental bronchus").save()
+            >>> bt.Tissue.from_source(name="subsegmental bronchus").save()
             >>> record = bt.Tissue.filter(name="respiratory tube").one()
             >>> record.view_parents()
             >>> tissue.view_parents(with_children=True)
@@ -732,7 +732,7 @@ def lookup(
         Examples:
             >>> import bionty as bt
             >>> bt.settings.organism = "human"
-            >>> bt.Gene.from_public(symbol="ADGB-DT").save()
+            >>> bt.Gene.from_source(symbol="ADGB-DT").save()
             >>> lookup = bt.Gene.lookup()
             >>> lookup.adgb_dt
             >>> lookup_dict = lookup.dict()