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algo
algo
 
 
apps
apps
 
 
data
data
 
 
disp
disp
 
 
runs
runs
 
 
sims
sims
 
 
test
test
 
 
util
util
 
 
AnnulusMetric.ipynb
AnnulusMetric.ipynb
 
 
BrainAtlasBuilding3DUkf.ipynb
BrainAtlasBuilding3DUkf.ipynb
 
 
BrainAtlasBuilding3DUkf.py
BrainAtlasBuilding3DUkf.py
 
 
BrainAtlasBuilding3DUkfCuda.py
BrainAtlasBuilding3DUkfCuda.py
 
 
BrainAtlasBuilding3DUkfCudaImg.py
BrainAtlasBuilding3DUkfCudaImg.py
 
 
BrainAtlasBuilding3DUkfImg.py
BrainAtlasBuilding3DUkfImg.py
 
 
ComputeGeodesics.ipynb
ComputeGeodesics.ipynb
 
 
ConstructAtlasAfterOptimization.py
ConstructAtlasAfterOptimization.py
 
 
ConstructCubicAtlasAfterOptimization.py
ConstructCubicAtlasAfterOptimization.py
 
 
ConstructHCPAtlasAfterOptimization.py
ConstructHCPAtlasAfterOptimization.py
 
 
CubicAtlasBuilding.ipynb
CubicAtlasBuilding.ipynb
 
 
CubicAtlasBuilding3DCudaImg.py
CubicAtlasBuilding3DCudaImg.py
 
 
CubicAtlasBuilding3DCudaImgOnly.py
CubicAtlasBuilding3DCudaImgOnly.py
 
 
CubicAtlasBuilding3DCudaTexture.py
CubicAtlasBuilding3DCudaTexture.py
 
 
CubicGeodesicsHausdorffDist.ipynb
CubicGeodesicsHausdorffDist.ipynb
 
 
DissertationImages.ipynb
DissertationImages.ipynb
 
 
EbinFormulas.ipynb
EbinFormulas.ipynb
 
 
EbinGeodesicEvolution.ipynb
EbinGeodesicEvolution.ipynb
 
 
EigSymComputation.ipynb
EigSymComputation.ipynb
 
 
EigenvectorAmbiguity.ipynb
EigenvectorAmbiguity.ipynb
 
 
HCPAtlasBuilding.py
HCPAtlasBuilding.py
 
 
HCPRegister2Images.py
HCPRegister2Images.py
 
 
LICENSE
LICENSE
 
 
MELBAPlots.ipynb
MELBAPlots.ipynb
 
 
QC_ABCD_prelim_results.ipynb
QC_ABCD_prelim_results.ipynb
 
 
README.md
README.md
 
 
RegisterToAtlas3DCudaImg.py
RegisterToAtlas3DCudaImg.py
 
 
View_DTITK_Atlas.ipynb
View_DTITK_Atlas.ipynb
 
 
WarpSubjectsAfterRegistration.py
WarpSubjectsAfterRegistration.py
 
 
__init__.py
__init__.py
 
 
explore_ABCD_anxiety_subjs_measures.ipynb
explore_ABCD_anxiety_subjs_measures.ipynb
 
 
findInitialVelocityForPhi.py
findInitialVelocityForPhi.py
 
 
lazy_imports.py
lazy_imports.py
 
 
test.ipynb
test.ipynb
 
 

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DiffeomorphicMetricMatching

Diffeomorphic metric matching and atlas building tools

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Diffeomorphic metric matching and atlas building tools

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