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This code reproduces some results from the paper: Memory replay in balanced recurrent networks. N. Chenkov, H. Sprekeler, R. Kempter PLoS Comput. Biol., 13(1):e1005359, 2017. DOI: 10.1371/journal.pcbi.1005359 http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1005359 The code managed to cold-rot, and old packages need to be imported. One way to run the program is to create a virtual environment. The following lines create a virtual environment in python2, activate it, and install old versions of scipy, numpy and brian through pip: virtualenv2 assembly_vm source assembly_vm/bin/activate pip install scipy==0.17 pip install numpy==1.10.4 pip install brian=1.4.1 The main file is assemblyseq.py. 'run assemblyseq' in a python shell should illustrate activity propagation through an assembly sequence.
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