Skip to content

Commit

Permalink
Update version in README
Browse files Browse the repository at this point in the history
  • Loading branch information
kkrismer committed Oct 29, 2020
1 parent a06d102 commit a8cc40f
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions README.md
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
# IDR2D: Irreproducible Discovery Rate for Genomic Interactions

[![license: MIT](https://img.shields.io/badge/license-MIT-blue.svg)](https://opensource.org/licenses/MIT) [![DOI](https://img.shields.io/badge/DOI-10.1101%2F691295-blue.svg)](https://doi.org/10.1093/nar/gkaa030) [![BioC](https://img.shields.io/badge/BioC-1.2.2-brightgreen.svg)](https://doi.org/doi:10.18129/B9.bioc.idr2d) [![platforms](https://www.bioconductor.org/shields/availability/3.11/idr2d.svg)](https://www.bioconductor.org/packages/release/bioc/html/idr2d.html#archives) [![Coverage Status](https://coveralls.io/repos/github/kkrismer/idr2d/badge.svg?branch=master)](https://coveralls.io/github/kkrismer/idr2d?branch=master)
[![license: MIT](https://img.shields.io/badge/license-MIT-blue.svg)](https://opensource.org/licenses/MIT) [![DOI](https://img.shields.io/badge/DOI-10.1101%2F691295-blue.svg)](https://doi.org/10.1093/nar/gkaa030) [![BioC](https://img.shields.io/badge/BioC-1.4.0-brightgreen.svg)](https://doi.org/doi:10.18129/B9.bioc.idr2d) [![platforms](https://www.bioconductor.org/shields/availability/3.11/idr2d.svg)](https://www.bioconductor.org/packages/release/bioc/html/idr2d.html#archives) [![Coverage Status](https://coveralls.io/repos/github/kkrismer/idr2d/badge.svg?branch=master)](https://coveralls.io/github/kkrismer/idr2d?branch=master)

Chromatin interaction data from protocols such as ChIA-PET and HiChIP provide valuable insights into genome organization and gene regulation, but can include spurious interactions that do not reflect underlying genome biology. We introduce a generalization of the Irreproducible Discovery Rate (IDR) method called IDR2D that identifies replicable interactions shared by experiments. IDR2D provides a principled set of interactions and eliminates artifacts from single experiments.

Expand Down Expand Up @@ -115,8 +115,8 @@ draw_hic_contact_map(idr_results, idr_cutoff = 0.05, chromosome = "chr1")
| Platform | Status |
|------|------|
| Travis CI | [![Travis build status](https://travis-ci.org/kkrismer/idr2d.svg?branch=master)](https://travis-ci.org/kkrismer/idr2d) |
| Bioconductor 3.11 (release) | [![BioC release](https://bioconductor.org/shields/build/release/bioc/idr2d.svg)](http://bioconductor.org/checkResults/release/bioc-LATEST/idr2d/) |
| Bioconductor 3.12 (devel) | [![BioC devel](https://bioconductor.org/shields/build/devel/bioc/idr2d.svg)](http://bioconductor.org/checkResults/devel/bioc-LATEST/idr2d/) |
| Bioconductor 3.12 (release) | [![BioC release](https://bioconductor.org/shields/build/release/bioc/idr2d.svg)](http://bioconductor.org/checkResults/release/bioc-LATEST/idr2d/) |
| Bioconductor 3.13 (devel) | [![BioC devel](https://bioconductor.org/shields/build/devel/bioc/idr2d.svg)](http://bioconductor.org/checkResults/devel/bioc-LATEST/idr2d/) |

## Citation

Expand Down

0 comments on commit a8cc40f

Please sign in to comment.