Merge pull request #1 from kitzeslab/fix_typos

fix missing imports, typos and errors. Use mp3 instead of wav. Refactor so that Notebook 2 is training and 3 is evaluation.
kitzeslab · Jul 20, 2023 · c4ac5a7 · c4ac5a7
2 parents f490911 + c150c94
commit c4ac5a7
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Showing 12 changed files with 10,596 additions and 11,639 deletions.
diff --git a/01_Audio_and_Spectrogram.ipynb b/01_Audio_and_Spectrogram.ipynb
diff --git a/02_train_CNN.ipynb b/02_train_CNN.ipynb
diff --git a/03_evaluate_CNN.ipynb b/03_evaluate_CNN.ipynb
diff --git a/04_signal_processing.ipynb b/04_signal_processing.ipynb
diff --git a/...ta/Annotation_Files/move_annotations_here → ...02/annotated_data/Annotation_Files/.blank b/...ta/Annotation_Files/move_annotations_here → ...02/annotated_data/Annotation_Files/.blank
diff --git a/...ated_data/Recordings/move_recordings_here → ...urces/02/annotated_data/Recordings/.blank b/...ated_data/Recordings/move_recordings_here → ...urces/02/annotated_data/Recordings/.blank
diff --git a/resources/02/test_set.csv b/resources/02/test_set.csv
diff --git a/resources/02/training_set.csv b/resources/02/training_set.csv
diff --git a/resources/03/cnn_predictions_test_set.csv b/resources/03/cnn_predictions_test_set.csv
diff --git a/resources/03/test_set.csv b/resources/03/test_set.csv
diff --git a/resources/03/training_set.csv b/resources/03/training_set.csv
diff --git a/resources/04/nofl_keek_df.csv b/resources/04/nofl_keek_df.csv
@@ -1,16 +1,16 @@
-clip,start_time,end_time,low_f,high_f,call_type
-Recording_1_Segment_23,17.219172932,19.750293605,2482.6,3499.1,keek
-Recording_1_Segment_23,100.46331865,104.715601381,2595.3,3570.9,keek
-Recording_1_Segment_23,122.952206709,126.447563829,2397.6,3399.9,keek
-Recording_1_Segment_29,138.433920016,148.429373806,2032.4,3221.2,keek
-Recording_1_Segment_29,169.157986552,178.007985883,2070.8,3144.5,keek
-Recording_1_Segment_29,205.926583847,213.406128736,2090.0,4064.9,keek
-Recording_1_Segment_29,249.811498117,255.470588598,1840.7,3585.5,keek
-Recording_1_Segment_29,284.270849277,289.425394342,2032.4,3317.1,keek
-Recording_2_Segment_09,206.49775771,211.574462603,2033.4,3432.5,keek
-Recording_2_Segment_09,234.10036468400003,237.841602098,2294.5,3488.5,keek
-Recording_2_Segment_09,258.388577798,263.161548211,2126.6,3469.8,keek
-Recording_2_Segment_09,278.715165714,282.620323324,1846.8,3451.1,keek
-Recording_4_Segment_21,92.210880642,95.088153152,1096.5,1774.4,keek
-Recording_4_Segment_21,200.621334328,202.561106909,1056.6,3289.6,keek
-Recording_4_Segment_21,254.053975997,256.531136738,1016.8,2044.6,keek
+audio_file,start_time,end_time,low_f,high_f,annotation
+./resources/04/clips/Recording_1_Segment_23.mp3,17.219172932,19.750293605,2482.6,3499.1,keek
+./resources/04/clips/Recording_1_Segment_23.mp3,100.46331865,104.715601381,2595.3,3570.9,keek
+./resources/04/clips/Recording_1_Segment_23.mp3,122.952206709,126.447563829,2397.6,3399.9,keek
+./resources/04/clips/Recording_1_Segment_29.mp3,138.433920016,148.429373806,2032.4,3221.2,keek
+./resources/04/clips/Recording_1_Segment_29.mp3,169.157986552,178.007985883,2070.8,3144.5,keek
+./resources/04/clips/Recording_1_Segment_29.mp3,205.926583847,213.406128736,2090.0,4064.9,keek
+./resources/04/clips/Recording_1_Segment_29.mp3,249.811498117,255.470588598,1840.7,3585.5,keek
+./resources/04/clips/Recording_1_Segment_29.mp3,284.270849277,289.425394342,2032.4,3317.1,keek
+./resources/04/clips/Recording_2_Segment_09.mp3,206.49775771,211.574462603,2033.4,3432.5,keek
+./resources/04/clips/Recording_2_Segment_09.mp3,234.10036468400003,237.841602098,2294.5,3488.5,keek
+./resources/04/clips/Recording_2_Segment_09.mp3,258.388577798,263.161548211,2126.6,3469.8,keek
+./resources/04/clips/Recording_2_Segment_09.mp3,278.715165714,282.620323324,1846.8,3451.1,keek
+./resources/04/clips/Recording_4_Segment_21.mp3,92.210880642,95.088153152,1096.5,1774.4,keek
+./resources/04/clips/Recording_4_Segment_21.mp3,200.621334328,202.561106909,1056.6,3289.6,keek
+./resources/04/clips/Recording_4_Segment_21.mp3,254.053975997,256.531136738,1016.8,2044.6,keek