📝 updated version and docs for wf and annofuse

docs/D3B_ANNOFUSE.md

@@ -13,8 +13,8 @@ Please refer to [annoFuse](https://github.com/d3b-center/annoFuse) R package for
 ```yaml
 inputs:
   sample_name: { type: 'string', doc: "Sample name used for file base name of all outputs" }
-  FusionGenome: { type: 'File', doc: "GRCh38_v27_CTAT_lib_Feb092018.plug-n-play.tar.gz", sbg:suggestedValue: { class: 'File', path: '5d9c8d04e4b0950cce147f94', name: 'GRCh38_v27_CTAT_lib_Feb092018.plug-n-play.tar.gz' }}
-  genome_untar_path: { type: 'string?', doc: "This is what the path will be when genome_tar is unpackaged", default: "GRCh38_v27_CTAT_lib_Feb092018/ctat_genome_lib_build_dir" }
+  FusionGenome: { type: 'File', doc: "GRCh38_v27_CTAT_lib_Feb092018.plug-n-play.tar.gz", "sbg:suggestedValue": { class: 'File', path: '62853e7ad63f7c6d8d7ae5a8', name: 'GRCh38_v39_CTAT_lib_Mar242022.CUSTOM.tar.gz' }}
+  genome_untar_path: { type: 'string?', doc: "This is what the path will be when genome_tar is unpackaged", default: "GRCh38_v39_CTAT_lib_Mar242022.CUSTOM" }
   rsem_expr_file: { type: 'File', doc: "gzipped rsem gene expression file" }
   arriba_output_file: { type: 'File', doc: "Output from arriba, usually extension arriba.fusions.tsv" }
   col_num: { type: 'int?', doc: "column number in file of fusion name." }
@@ -32,5 +32,5 @@ inputs:
 
 ```yaml
 outputs:
-  annofuse_filtered_fusions_tsv: {type: File, outputSource: annoFuse_filter/filtered_fusions_tsv, doc: "Filtred output of formatted and annotated Star Fusion and arriba results"}
+  annofuse_filtered_fusions_tsv: {type: File, outputSource: annoFuse_filter/filtered_fusions_tsv, doc: "Filtered output of formatted and annotated Star Fusion and arriba results"}
 ```

workflow/kfdrc_RNAseq_workflow.cwl

@@ -865,5 +865,5 @@ hints:
 - SE
 - STAR
 "sbg:links":
-- id: 'https://github.com/kids-first/kf-rnaseq-workflow/releases/tag/v4.2.0'
+- id: 'https://github.com/kids-first/kf-rnaseq-workflow/releases/tag/v4.2.1'
   label: github-release