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📝 snuck in an updated cost estimate
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migbro committed Jun 20, 2022
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11 changes: 9 additions & 2 deletions README.md
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Expand Up @@ -41,8 +41,15 @@ This workflow is the current production workflow, equivalent to this [Cavatica p
## Usage

### Runtime Estimates:
- 8 GB paired end FASTQ input: 9 hours & $9.00
- 19 GB PE BAM input: 9 hours 30 Minutes & $9.50
Based on a test set of five input bams, Cavatica compute and storage estimates:
- Typical 2 hour run time, 10 hours is a higher end possibility
- Cost:
- Pure spot instances with no terminations: $2.37 mean
- Pure on-demand: $5.19 mean
- Warning: If spot instance kill rate is high, especially for `c5.9xlarge` instance type, the cost could end up greater than on-demand
- Storage:
- Total output size 6GB mean
- Storage estimate ~ $0.14 per month

### Inputs common:
```yaml
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11 changes: 9 additions & 2 deletions workflow/kfdrc_RNAseq_workflow.cwl
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Expand Up @@ -46,8 +46,15 @@ doc: |-
## Usage

### Runtime Estimates:
- 8 GB paired end FASTQ input: 9 hours & $9.00
- 19 GB PE BAM input: 9 hours 30 Minutes & $9.50
Based on a test set of five input bams, Cavatica compute and storage estimates:
- Typical 2 hour run time, 10 hours is a higher end possibility
- Cost:
- Pure spot instances with no terminations: $2.37 mean
- Pure on-demand: $5.19 mean
- Warning: If spot instance kill rate is high, especially for `c5.9xlarge` instance type, the cost could end up greater than on-demand
- Storage:
- Total output size 6GB mean
- Storage estimate ~ $0.14 per month

### Inputs common:
```yaml
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