feat(variants): SKFP-1410 remove export tsv

kids-first · Dec 18, 2024 · 18135bf · 18135bf
1 parent 0f6484f
commit 18135bf
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Showing 5 changed files with 3 additions and 76 deletions.
diff --git a/.env.schema b/.env.schema
@@ -49,9 +49,6 @@ REACT_APP_FT_DASHBOARD_BANNER=true
 REACT_APP_FT_DASHBOARD_BANNER_TYPE=info
 REACT_APP_FT_DASHBOARD_BANNER_MSG="A wonderful notification"
 
-# FEATURE TOGGLE Variant
-REACT_APP_FT_VARIANTS_EXPORT=true
-
 # MOCK
 REACT_MOCK_AUTORIZE_STUDIES=true
 REACT_MOCK_LOGIN=true

diff --git a/src/locales/en.ts b/src/locales/en.ts
@@ -1238,12 +1238,6 @@ const en = {
         variant: 'Variant',
         variant_class: 'Variant class',
         variant_id: 'Variant ID',
-        exportModal: {
-          title: 'Maximum number exceeded',
-          content:
-            'A maximum of 10,000 items can be exported at a time. Please narrow your selection and try again.',
-          button: 'Close',
-        },
       },
       summary: {
         summary: 'Summary',

diff --git a/src/views/Variants/components/PageContent/VariantsTable/index.module.css b/src/views/Variants/components/PageContent/VariantsTable/index.module.css
@@ -87,7 +87,3 @@
 .partCell {
   padding-left: 4px;
 }
-
-.okButtonConfirmModal {
-  display: none;
-}
diff --git a/src/views/Variants/components/PageContent/VariantsTable/index.tsx b/src/views/Variants/components/PageContent/VariantsTable/index.tsx
@@ -2,7 +2,6 @@ import { useEffect, useState } from 'react';
 import intl from 'react-intl-universal';
 import { useDispatch } from 'react-redux';
 import { Link } from 'react-router-dom';
-import { ExclamationCircleOutlined } from '@ant-design/icons';
 import ConsequencesCell from '@ferlab/ui/core/components/Consequences/Cell';
 import ExternalLink from '@ferlab/ui/core/components/ExternalLink';
 import FixedSizeTable from '@ferlab/ui/core/components/FixedSizeTable';
@@ -22,7 +21,7 @@ import {
 } from '@ferlab/ui/core/graphql/types';
 import { numberWithCommas, toExponentialNotation } from '@ferlab/ui/core/utils/numberUtils';
 import GridCard from '@ferlab/ui/core/view/v2/GridCard';
-import { Modal, Space, Tooltip } from 'antd';
+import { Space, Tooltip } from 'antd';
 import { INDEXES } from 'graphql/constants';
 import { hydrateResults } from 'graphql/models';
 import {
@@ -34,16 +33,14 @@ import {
   IVariantInternalFrequencies,
   IVariantStudyEntity,
 } from 'graphql/variants/models';
-import { getFTEnvVarByKey } from 'helpers/EnvVariables';
-import { capitalize, isEmpty } from 'lodash';
+import { capitalize } from 'lodash';
 import SetsManagementDropdown from 'views/DataExploration/components/SetsManagementDropdown';
 import { DATA_EXPLORATION_QB_ID, DEFAULT_PAGE_INDEX } from 'views/DataExploration/utils/constant';
 
 import { TABLE_EMPTY_PLACE_HOLDER } from 'common/constants';
 import ExternalLinkIcon from 'components/Icons/ExternalLinkIcon';
 import ManeCell from 'components/ManeCell';
 import { SetType } from 'services/api/savedSet/models';
-import { fetchTsvReport } from 'store/report/thunks';
 import { useUser } from 'store/user';
 import { updateUserConfig } from 'store/user/thunks';
 import { formatQuerySortList, scrollToTop } from 'utils/helper';
@@ -53,12 +50,10 @@ import { getProTableDictionary } from 'utils/translation';
 
 import { SCROLL_WRAPPER_ID, VARIANT_SAVED_SETS_FIELD } from '../../../utils/constants';
 
-import { exportTsvColumns, GnomadCircle, renderClinvar, renderOmim } from './utils';
+import { GnomadCircle, renderClinvar, renderOmim } from './utils';
 
 import styles from './index.module.css';
 
-const EXPORT_TSV_LIMIT = 10000;
-
 interface OwnProps {
   pageIndex: number;
   sqon?: ISqonGroupFilter;
@@ -465,8 +460,6 @@ const VariantsTable = ({
   const [selectedRows, setSelectedRows] = useState<IVariantEntity[]>([]);
   const [selectedAllResults, setSelectedAllResults] = useState(false);
 
-  const variantsExport = getFTEnvVarByKey('VARIANTS_EXPORT');
-
   const getCurrentSqon = (): any =>
     selectedAllResults || !selectedKeys.length
       ? sqon
@@ -521,7 +514,6 @@ const VariantsTable = ({
                   total: results.total,
                 },
                 enableColumnSort: true,
-                enableTableExport: variantsExport === 'true' ? true : false,
                 onColumnSortChange: (newState) =>
                   dispatch(
                     updateUserConfig({
@@ -539,37 +531,6 @@ const VariantsTable = ({
                   setSelectedKeys(keys);
                   setSelectedRows(selectedRows);
                 },
-                onTableExportClick: () => {
-                  if (
-                    selectedRows.length > EXPORT_TSV_LIMIT ||
-                    (isEmpty(selectedRows) &&
-                      !selectedAllResults &&
-                      results.total > EXPORT_TSV_LIMIT) ||
-                    (selectedAllResults && results.total > EXPORT_TSV_LIMIT)
-                  ) {
-                    Modal.confirm({
-                      title: intl.get('screen.variants.table.exportModal.title'),
-                      icon: <ExclamationCircleOutlined />,
-                      content: intl.get('screen.variants.table.exportModal.content'),
-                      cancelText: intl.get('screen.variants.table.exportModal.button'),
-                      okButtonProps: { className: styles.okButtonConfirmModal },
-                      cancelButtonProps: { type: 'primary' },
-                      type: 'warn',
-                    });
-                  } else {
-                    dispatch(
-                      fetchTsvReport({
-                        columnStates: exportTsvColumns,
-                        columns: getDefaultColumns(
-                          queryBuilderId,
-                          results.data.length === 0 ? true : false,
-                        ),
-                        index: INDEXES.VARIANTS,
-                        sqon: getCurrentSqon(),
-                      }),
-                    );
-                  }
-                },
                 extra: [
                   <SetsManagementDropdown
                     idField={VARIANT_SAVED_SETS_FIELD}

diff --git a/src/views/Variants/components/PageContent/VariantsTable/utils.tsx b/src/views/Variants/components/PageContent/VariantsTable/utils.tsx
@@ -1,7 +1,6 @@
 import intl from 'react-intl-universal';
 import { TABLE_EMPTY_PLACE_HOLDER } from '@ferlab/ui/core/common/constants';
 import ExternalLink from '@ferlab/ui/core/components/ExternalLink';
-import { TColumnStates } from '@ferlab/ui/core/components/ProTable/types';
 import { IArrangerResultsTree } from '@ferlab/ui/core/graphql/types';
 import StackLayout from '@ferlab/ui/core/layout/StackLayout';
 import { Space, Tag, Tooltip } from 'antd';
@@ -119,23 +118,3 @@ export const GnomadCircle = ({ underOnePercent }: GnomadCircleProps) => (
     )}
   />
 );
-
-export const exportTsvColumns: TColumnStates = [
-  { index: 0, key: 'hgvsg', visible: true },
-  { index: 1, key: 'variant_class', visible: true },
-  { index: 2, key: 'rsnumber', visible: true },
-  { index: 3, key: 'genes.symbol', visible: true },
-  { index: 4, key: 'genes.consequences.consequence', visible: true },
-  { index: 5, key: 'genes.consequences.aa_change', visible: true },
-  { index: 6, key: 'genes.omim_gene_id', visible: true },
-  { index: 7, key: 'genes.omim.inheritance', visible: true },
-  { index: 8, key: 'clinvar.clin_sig', visible: true },
-  { index: 9, key: 'external_frequencies.gnomad_genomes_3.af', visible: true },
-  { index: 10, key: 'external_frequencies.gnomad_genomes_3.ac', visible: true },
-  { index: 11, key: 'internal_frequencies.total.pc', visible: true },
-  { index: 12, key: 'studies.study_code', visible: true },
-  { index: 13, key: 'genes.consequences.predictions.cadd_phred', visible: true },
-  { index: 14, key: 'genes.consequences.predictions.revel_score', visible: true },
-  { index: 15, key: 'internal_frequencies.total.ac', visible: true },
-  { index: 16, key: 'internal_frequencies.total.hom', visible: true },
-];