Update submodule #90

	name: Update submodule
	on:
	workflow_dispatch:
	schedule:
	- cron: "0 1 * * 1"
	push:
	branches:
	- main

	env:
	actor: "41898282+github-actions[bot]"

	jobs:
	update-submod:
	runs-on: ubuntu-latest
	defaults:
	run:
	shell: bash -l {0}
	steps:
	- uses: actions/checkout@v2
	with:
	submodules: recursive
	- name: Configure git
	run: \|
	git config --local user.email "${actor}@users.noreply.github.com"
	git config --local user.name "$actor"
	- name: Update submodule
	run: \|
	git submodule update --remote
	- name: Copy submod files
	uses: snakemake/[email protected]
	with:
	directory: .
	snakefile: Snakefile
	args: "copy_submod_files --forcerun copy_submod_files -c 1"
	- name: Commit & Push
	run: \|
	git add _extensions/rackham/
	git commit -m "🤖 Update extension from submodule" \|\| echo "No changes to commit"
	git push

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