round time

kbase · Aug 19, 2024 · 1257e43 · 1257e43
1 parent c637562
commit 1257e43
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Showing 5 changed files with 5 additions and 5 deletions.
diff --git a/src/loaders/compute_tools/checkm2/checkm2.py b/src/loaders/compute_tools/checkm2/checkm2.py
@@ -80,7 +80,7 @@ def _run_checkm2(
                     "comment": "diamond_db, ver unknown",
                     },
                 'ids_to_files': make_json_serializable(ids_to_files),
-                'run_time': run_time,
+                'run_time': round(run_time, 2),
                 'batch_size': size,
                 }
     create_tool_metadata(output_dir, metadata)

diff --git a/src/loaders/compute_tools/eggnog/eggnog.py b/src/loaders/compute_tools/eggnog/eggnog.py
@@ -60,7 +60,7 @@ def _run_eggnog_single(
                 "reference_db": {
                     "version": "5.0.2",
                     },
-                'run_time': run_time,
+                'run_time': round(run_time, 2),
                 'batch_size': 1,
                 }
     create_tool_metadata(output_dir, metadata)

diff --git a/src/loaders/compute_tools/gtdb_tk/gtdb_tk.py b/src/loaders/compute_tools/gtdb_tk/gtdb_tk.py
@@ -160,7 +160,7 @@ def _run_gtdb_tk(
                     "version": "release214",
                     },
                 'ids_to_files': make_json_serializable(ids_to_files),
-                'run_time': run_time,
+                'run_time': round(run_time, 2),
                 'batch_size': size,}
     create_tool_metadata(output_dir, metadata)
 

diff --git a/src/loaders/compute_tools/mash/mash.py b/src/loaders/compute_tools/mash/mash.py
@@ -55,7 +55,7 @@ def _run_mash_single(
                 'tool_name': 'mash',
                 'version': '2.0',
                 'command': command,
-                'run_time': run_time,
+                'run_time': round(run_time, 2),
                 'batch_size': 1,
                 }
     create_tool_metadata(output_dir, metadata)

diff --git a/src/loaders/compute_tools/microtrait/microtrait.py b/src/loaders/compute_tools/microtrait/microtrait.py
@@ -283,7 +283,7 @@ def _run_microtrait(
                 'tool_name': 'microtrait',
                 'version': 'None',
                 'command': 'None - R script',
-                'run_time': run_time,
+                'run_time': round(run_time, 2),
                 'batch_size': 1,
                 }
     create_tool_metadata(genome_dir, metadata)