Merge pull request #109 from kbase/dev_jupyterhub #356

	name: CDM Jupyterhub tests

	on:
	pull_request:
	types:
	- opened
	- reopened
	- synchronize
	- ready_for_review
	push:
	# run workflow when merging to main or develop
	branches:
	- main
	- master
	- develop

	jobs:

	cdm_jupyterhub_tests:
	runs-on: ubuntu-latest
	strategy:
	matrix:
	python-version: ["3.11"]

	steps:

	- name: Repo checkout
	uses: actions/checkout@v4

	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v5
	with:
	python-version: ${{ matrix.python-version }}

	- name: Install system dependencies
	run: \|
	sudo apt-get update
	sudo apt-get install -y \
	graphviz \
	graphviz-dev

	- name: Install dependencies
	# tried VaultVulp/action-pipenv but pytest wasn't on the path post action
	shell: bash
	run: \|
	pip install pipenv
	pipenv sync --system --dev

	- name: Run tests
	shell: bash
	run: PYTHONPATH=src pytest --cov=src --cov-report=xml test

	- name: Upload coverage to Codecov
	uses: codecov/codecov-action@v4
	with:
	token: ${{ secrets.CODECOV_TOKEN }}
	fail_ci_if_error: true

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