[WIP] mongo7 upgrade #30
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| name: KBase Catalog test | |
| on: | |
| pull_request: | |
| types: | |
| - opened | |
| - reopened | |
| - synchronize | |
| - ready_for_review | |
| push: | |
| # run workflow when merging to main or develop | |
| branches: | |
| - main | |
| - master | |
| - develop | |
| jobs: | |
| catalog_tests: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - python-version: '3.7' | |
| mongo-version: '3.6' | |
| - python-version: '3.7' | |
| mongo-version: '7.0.4' | |
| services: | |
| mongo: | |
| image: mongo:${{matrix.mongo-version}} | |
| ports: | |
| - 27017:27017 | |
| options: --name mongo${{matrix.mongo-version}} | |
| steps: | |
| - name: Repo checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: recursive | |
| - name: Setup Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{matrix.python-version}} | |
| - name: Install dependencies and set up test config | |
| shell: bash | |
| env: | |
| KBASE_CI_TOKEN: ${{ secrets.KBASE_CI_TOKEN }} | |
| ADMIN_USER: ${{ secrets.KBASE_BOT_USER_CI }} | |
| run: | | |
| # test mongo connection | |
| curl http://localhost:27017 | |
| returncode=$? | |
| if [ $returncode != 0 ]; then exit $returncode; fi | |
| # set HOMEDIR | |
| export HOMEDIR=`pwd` | |
| # move to parent dir to install binaries etc | |
| cd .. | |
| # setup kb-sdk | |
| mkdir -p $(pwd)/bin | |
| docker run ghcr.io/kbase/kb_sdk_patch-develop:br-0.0.4 genscript > $(pwd)/bin/kb-sdk | |
| chmod 755 $(pwd)/bin/kb-sdk | |
| export PATH=$(pwd)/bin:$PATH | |
| # install catalog dependencies | |
| cd $HOMEDIR | |
| pip install -r requirements.txt | |
| # setup test config | |
| cp -n test/test.cfg.example test/test.cfg | |
| sed -i "s#^nms-admin-token.*#nms-admin-token=$KBASE_CI_TOKEN#" test/test.cfg | |
| sed -i "s#^method-spec-admin-users.*#method-spec-admin-users=$ADMIN_USER#" test/test.cfg | |
| - name: Run tests | |
| shell: bash | |
| run: make test | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| fail_ci_if_error: true |