Merge pull request #99 from willcerny/master #19
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| # For more information on conda actions see: https://autobencoder.com/2020-08-24-conda-actions/ | |
| # Starter workflow for conda: https://github.com/actions/starter-workflows/blob/main/ci/python-package-conda.yml | |
| name: build | |
| on: | |
| push: | |
| pull_request: | |
| workflow_dispatch: | |
| schedule: | |
| - cron: '0 0 1 * *' | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| max-parallel: 3 | |
| matrix: | |
| python-version: ["3.7", "3.8", "3.9"] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Setup conda | |
| run: | | |
| # Add $CONDA/bin to built-in path | |
| echo $CONDA/bin >> $GITHUB_PATH | |
| conda update -q conda | |
| conda info | |
| - name: Create conda environment | |
| run: | | |
| conda create -y -q -n env python=${{ matrix.python-version }} numpy scipy matplotlib astropy healpy pyyaml emcee fitsio corner -c conda-forge | |
| # Add UGALIDIR to environment | |
| conda env config vars set UGALIDIR=$HOME/.ugali -n env | |
| - name: Install package | |
| run: | | |
| source activate env | |
| conda env config vars list | |
| python setup.py -q install --isochrones --catalogs --tests | |
| - name: Lint with flake8 | |
| if: ${{ true }} | |
| run: | | |
| source activate env | |
| conda install -q flake8 -c conda-forge | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| - name: Test with nose | |
| run: | | |
| source activate env | |
| conda install -q nose -c conda-forge | |
| export MPLBACKEND=Agg | |
| # Exclude notebook tests | |
| nosetests -v -I test_notebook.py; | |
| - name: Test notebooks | |
| if: ${{ true }} | |
| run: | | |
| source activate env | |
| conda install -q jupyter nbconvert -c conda-forge | |
| # Run notebook tests | |
| nosetests -v tests/test_notebook.py |