Merge pull request #99 from willcerny/master #19
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# This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
# For more information on conda actions see: https://autobencoder.com/2020-08-24-conda-actions/ | |
# Starter workflow for conda: https://github.com/actions/starter-workflows/blob/main/ci/python-package-conda.yml | |
name: build | |
on: | |
push: | |
pull_request: | |
workflow_dispatch: | |
schedule: | |
- cron: '0 0 1 * *' | |
jobs: | |
build: | |
runs-on: ubuntu-latest | |
strategy: | |
max-parallel: 3 | |
matrix: | |
python-version: ["3.7", "3.8", "3.9"] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Setup conda | |
run: | | |
# Add $CONDA/bin to built-in path | |
echo $CONDA/bin >> $GITHUB_PATH | |
conda update -q conda | |
conda info | |
- name: Create conda environment | |
run: | | |
conda create -y -q -n env python=${{ matrix.python-version }} numpy scipy matplotlib astropy healpy pyyaml emcee fitsio corner -c conda-forge | |
# Add UGALIDIR to environment | |
conda env config vars set UGALIDIR=$HOME/.ugali -n env | |
- name: Install package | |
run: | | |
source activate env | |
conda env config vars list | |
python setup.py -q install --isochrones --catalogs --tests | |
- name: Lint with flake8 | |
if: ${{ true }} | |
run: | | |
source activate env | |
conda install -q flake8 -c conda-forge | |
# stop the build if there are Python syntax errors or undefined names | |
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
- name: Test with nose | |
run: | | |
source activate env | |
conda install -q nose -c conda-forge | |
export MPLBACKEND=Agg | |
# Exclude notebook tests | |
nosetests -v -I test_notebook.py; | |
- name: Test notebooks | |
if: ${{ true }} | |
run: | | |
source activate env | |
conda install -q jupyter nbconvert -c conda-forge | |
# Run notebook tests | |
nosetests -v tests/test_notebook.py |