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Version numbering #70

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Version numbering #70

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justin13601
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@justin13601 justin13601 commented Jul 17, 2024

Summary by CodeRabbit

  • New Features

    • Enhanced data processing capabilities with new event indexing columns.
    • Improved package metadata handling for better version tracking.
  • Chores

    • Updated setuptools version requirement to ensure compatibility and leverage new features.
    • Refined code to consistently include event indexing attributes in data structures.

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coderabbitai bot commented Jul 17, 2024

Walkthrough

The changes involve updating the setuptools version requirement in pyproject.toml, enhancing metadata handling in the aces package, and introducing new event index columns across multiple source files. These modifications improve the package's version management, enrich data processing functionalities, and enhance event tracking capabilities in the data handling processes.

Changes

Files Change Summary
pyproject.toml Updated setuptools version requirement from >=61.0 to >=64.
src/aces/__init__.py Added metadata handling using importlib.metadata, setting __package_name__ and __version__.
src/aces/aggregate.py Updated import statements and modified functions to exclude specific event index columns.
src/aces/extract_subtree.py Added new column _EVENT_INDEX, updated dataframe modifications, and adjusted predicate_cols.
src/aces/predicates.py Added columns for event indexing with cumulative sums over subject_id.
src/aces/types.py Introduced new types: EVENT_INDEX_TYPE, EVENT_INDEX_COLUMN, and LAST_EVENT_INDEX_COLUMN.
tests/test_e2e.py Added _LAST_EVENT_INDEX attribute to multiple data entries in test structures.

Poem

🐇✨

In the code, a subtle tune,
Setuptools rise to a new moon.
Events now indexed, clear and bright,
Data flows in perfect sight.
With each column, richly dressed,
Our package stands the test.

🌟📦


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Actionable comments posted: 0

Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

Commits

Files that changed from the base of the PR and between 669482e and bb43ef4.

Files selected for processing (7)
  • pyproject.toml (2 hunks)
  • src/aces/init.py (1 hunks)
  • src/aces/aggregate.py (27 hunks)
  • src/aces/extract_subtree.py (5 hunks)
  • src/aces/predicates.py (4 hunks)
  • src/aces/types.py (1 hunks)
  • tests/test_e2e.py (8 hunks)
Files skipped from review due to trivial changes (3)
  • src/aces/init.py
  • src/aces/types.py
  • tests/test_e2e.py
Additional comments not posted (11)
pyproject.toml (1)

32-32: Updated setuptools version requirement.

The version requirement for setuptools has been updated to >=64. This change should be cross-verified with the project's dependencies to ensure compatibility.

src/aces/extract_subtree.py (2)

11-11: Import of new columns.

The import of EVENT_INDEX_COLUMN and LAST_EVENT_INDEX_COLUMN has been added. Ensure that these columns are properly defined and used within the project.

Verification successful

Import of new columns verified.

The columns EVENT_INDEX_COLUMN and LAST_EVENT_INDEX_COLUMN are properly defined in src/aces/types.py and are used appropriately within the project.

  • EVENT_INDEX_COLUMN is used in src/aces/extract_subtree.py, src/aces/predicates.py, and src/aces/aggregate.py.
  • LAST_EVENT_INDEX_COLUMN is used in src/aces/extract_subtree.py.
Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Description: Verify the definition and usage of EVENT_INDEX_COLUMN and LAST_EVENT_INDEX_COLUMN.
# Test: Search for definitions and usages in the project.
rg --type py -A 5 $'EVENT_INDEX_COLUMN|LAST_EVENT_INDEX_COLUMN'

Length of output: 3677


137-137: Updated data processing logic in extract_subtree.

The function now includes additional columns (_EVENT_INDEX) in the input data and modifies the handling of predicate columns to exclude EVENT_index_COLUMN. Also, a new column LAST_EVENT_INDEX_COLUMN is added to the output dataframe. These changes enhance the data processing capabilities but should be tested thoroughly to ensure they integrate well with existing functionalities.

Also applies to: 149-160, 248-250, 333-333

src/aces/predicates.py (2)

13-14: Added new imports for event index handling.

The addition of EVENT_INDEX_COLUMN and EVENT_INDEX_TYPE imports should be verified for correct usage and potential impacts on the data processing logic.

Verification successful

The imports EVENT_INDEX_COLUMN and EVENT_INDEX_TYPE have been correctly integrated and are used consistently across the project for event indexing and data processing.

  • src/aces/aggregate.py: Utilized in column selection and cumulative sum calculations.
  • src/aces/types.py: Defined and used as constants.
  • src/aces/extract_subtree.py: Used in data extraction and transformation functions.
  • src/aces/predicates.py: Used for initializing and transforming data columns.
Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Description: Verify the correct usage and impact of EVENT_INDEX_COLUMN and EVENT_INDEX_TYPE.
# Test: Search for usage patterns and impacts in the project.
rg --type py -A 5 $'EVENT_INDEX_COLUMN|EVENT_INDEX_TYPE'

Length of output: 4014


Line range hint 490-520: Updated DataFrame expansion logic.

The DataFrame get_predicates_df has been expanded to include a new column _EVENT_INDEX. This change should be thoroughly tested to ensure it integrates well with existing data structures and processing logic.

Verification successful

Integration of _EVENT_INDEX column verified.

The _EVENT_INDEX column has been integrated and is referenced across multiple files, including end-to-end tests (tests/test_e2e.py), and various modules (src/aces/predicates.py, src/aces/types.py, src/aces/extract_subtree.py, src/aces/aggregate.py). This indicates thorough integration and testing of the new column within the existing data structures and processing logic.

  • tests/test_e2e.py: Multiple instances of _LAST_EVENT_INDEX and _ANY_EVENT suggest comprehensive test coverage.
  • src/aces/predicates.py: Direct inclusion of _EVENT_INDEX.
  • src/aces/types.py: Definition of EVENT_INDEX_COLUMN.
  • src/aces/extract_subtree.py: Usage of EVENT_INDEX_COLUMN.
  • src/aces/aggregate.py: Various references and operations involving _EVENT_INDEX.
Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Description: Verify the integration of the new column with existing data structures.
# Test: Check for integration issues in related data processing functions.
rg --type py -A 5 $'_EVENT_INDEX'

Length of output: 20354

src/aces/aggregate.py (6)

7-12: Review of Import Statements

The import statements are clear and necessary for the functionality of the module. The EVENT_INDEX_COLUMN and related types are correctly imported from the .types module, which is consistent with the project structure.


Line range hint 214-226: Review of aggregate_temporal_window Function

  1. Logic: The function correctly aggregates data based on temporal windows. The use of EVENT_INDEX_COLUMN for aggregation and exclusion is consistent with the PR objectives.
  2. Performance: Using pl.col().sum().cast() and pl.col().max() within the agg() function is efficient for this operation.
  3. Correctness: Ensure that EVENT_INDEX_COLUMN is consistently defined and used across the module to prevent any reference errors.

Overall, the implementation is logical and aligns with the expected functionality.


237-237: Usage of EVENT_INDEX_COLUMN

The inclusion of EVENT_INDEX_COLUMN in the output DataFrame helps maintain traceability of events through transformations, which is crucial for debugging and tracking within larger data flows.


314-320: Review of aggregate_event_bound_window Function

  1. Correctness: The function handles different types of event boundaries correctly. The use of drop("_EVENT_INDEX") in the examples is appropriate to simplify the output for demonstration purposes.
  2. Performance: The function efficiently handles event-bound windows by leveraging the capabilities of the Polars library.
  3. Logic: The logic to handle inclusive and exclusive bounds is correctly implemented. The function's flexibility to handle both tuples and ToEventWindowBounds objects as input enhances its usability.

This function is well-implemented and meets the requirements specified in the PR.

Also applies to: 336-337, 353-354, 370-371


Line range hint 512-759: Review of boolean_expr_bound_sum Function

  1. Complexity: The function is complex but well-documented, making it understandable. The detailed examples provided are helpful for understanding the expected behavior.
  2. Error Handling: The function correctly checks for invalid mode and closed parameters, raising appropriate errors.
  3. Performance: The function is designed to be efficient by using cumulative sums and conditional expressions to minimize the amount of data processed.

The implementation is robust, and the comprehensive documentation helps clarify the complex logic involved.


1042-1042: Final Output Considerations

The final output includes EVENT_INDEX_COLUMN, which ensures that the indexing information is preserved post-aggregation. This is crucial for maintaining data integrity and traceability in subsequent data processing steps.

@justin13601 justin13601 deleted the version-numbering branch July 17, 2024 00:30
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