make package name lowercase due to build issues

jrazi · Apr 26, 2024 · 78c5042 · 78c5042
1 parent 19e0133
commit 78c5042
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Showing 18 changed files with 16 additions and 13 deletions.
diff --git a/KnockOffOrigins/__init__.py → knockofforigins/__init__.py b/KnockOffOrigins/__init__.py → knockofforigins/__init__.py
diff --git a/KnockOffOrigins/data_gen.py → knockofforigins/data_gen.py b/KnockOffOrigins/data_gen.py → knockofforigins/data_gen.py
diff --git a/KnockOffOrigins/decompose.py → knockofforigins/decompose.py b/KnockOffOrigins/decompose.py → knockofforigins/decompose.py
diff --git a/KnockOffOrigins/evaluation.py → knockofforigins/evaluation.py b/KnockOffOrigins/evaluation.py → knockofforigins/evaluation.py
diff --git a/KnockOffOrigins/gram_matrix.py → knockofforigins/gram_matrix.py b/KnockOffOrigins/gram_matrix.py → knockofforigins/gram_matrix.py
diff --git a/KnockOffOrigins/knockoff.py → knockofforigins/knockoff.py b/KnockOffOrigins/knockoff.py → knockofforigins/knockoff.py
diff --git a/KnockOffOrigins/knockoff_construct.py → knockofforigins/knockoff_construct.py b/KnockOffOrigins/knockoff_construct.py → knockofforigins/knockoff_construct.py
@@ -1,7 +1,7 @@
 import numpy as np
 from numpy import ndarray
-from KnockOffOrigins.decompose import CholeskyDecomposition, Decompose
-from KnockOffOrigins.gram_matrix import (
+from knockofforigins.decompose import CholeskyDecomposition, Decompose
+from knockofforigins.gram_matrix import (
     compute_gram_matrix,
     generate_gram_matrix,
     normalize_features,

diff --git a/KnockOffOrigins/lasso.py → knockofforigins/lasso.py b/KnockOffOrigins/lasso.py → knockofforigins/lasso.py
diff --git a/KnockOffOrigins/plots.py → knockofforigins/plots.py b/KnockOffOrigins/plots.py → knockofforigins/plots.py
diff --git a/KnockOffOrigins/testatistics.py → knockofforigins/testatistics.py b/KnockOffOrigins/testatistics.py → knockofforigins/testatistics.py
diff --git a/KnockOffOrigins/utils.py → knockofforigins/utils.py b/KnockOffOrigins/utils.py → knockofforigins/utils.py
diff --git a/pyproject.toml b/pyproject.toml
@@ -26,3 +26,6 @@ pylint = "^3.1.0"
 [build-system]
 requires = ["poetry-core>=1.0.0"]
 build-backend = "poetry.core.masonry.api"
+
+
+
diff --git a/tests/test_data_gen.py b/tests/test_data_gen.py
@@ -1,6 +1,6 @@
 import numpy as np
 import pytest
-from KnockOffOrigins.data_gen import SyntheticDataGenerator, GWASDataGenerator
+from knockofforigins.data_gen import SyntheticDataGenerator, GWASDataGenerator
 
 
 class TestSyntheticDataGenerator:

diff --git a/tests/test_decompose.py b/tests/test_decompose.py
@@ -1,6 +1,6 @@
 import numpy as np
 import pytest
-from KnockOffOrigins.decompose import CholeskyDecomposition
+from knockofforigins.decompose import CholeskyDecomposition
 from tests.helpers import generate_matrix
 
 

diff --git a/tests/test_feature_selection.py b/tests/test_feature_selection.py
@@ -3,12 +3,12 @@
 import numpy as np
 import pytest
 from sklearn.exceptions import ConvergenceWarning
-from KnockOffOrigins.lasso import (
+from knockofforigins.lasso import (
     prepare_augmented_design_matrix,
     fit_lasso,
     compute_feature_importance,
 )
-from KnockOffOrigins.data_gen import (
+from knockofforigins.data_gen import (
     InfluentialFeatureGWASDataGenerator,
     SyntheticDataGenerator,
 )

diff --git a/tests/test_gram_matrix.py b/tests/test_gram_matrix.py
@@ -1,11 +1,11 @@
 import numpy as np
 import pytest
-from KnockOffOrigins.gram_matrix import (
+from knockofforigins.gram_matrix import (
     normalize_features,
     compute_gram_matrix,
     generate_gram_matrix,
 )
-from KnockOffOrigins.data_gen import SyntheticDataGenerator, GWASDataGenerator
+from knockofforigins.data_gen import SyntheticDataGenerator, GWASDataGenerator
 import numpy as np
 import pytest
 

diff --git a/tests/test_knockoff_construct.py b/tests/test_knockoff_construct.py
@@ -1,9 +1,9 @@
 import numpy as np
 import pytest
-from KnockOffOrigins.data_gen import SyntheticDataGenerator, GWASDataGenerator
-from KnockOffOrigins.decompose import CholeskyDecomposition
-from KnockOffOrigins.gram_matrix import compute_gram_matrix, normalize_features
-from KnockOffOrigins.knockoff_construct import (
+from knockofforigins.data_gen import SyntheticDataGenerator, GWASDataGenerator
+from knockofforigins.decompose import CholeskyDecomposition
+from knockofforigins.gram_matrix import compute_gram_matrix, normalize_features
+from knockofforigins.knockoff_construct import (
     choose_s_vector,
     generate_knockoff_features,
 )

diff --git a/tests/test_lasso.py b/tests/test_lasso.py
@@ -1,7 +1,7 @@
 import numpy as np
 import pytest
 from sklearn.exceptions import ConvergenceWarning
-from KnockOffOrigins.lasso import (
+from knockofforigins.lasso import (
     prepare_augmented_design_matrix,
     fit_lasso,
     compute_feature_importance,
Original file line number	Diff line number	Diff line change
Expand Up		@@ -26,3 +26,6 @@ pylint = "^3.1.0"
		[build-system]
		requires = ["poetry-core>=1.0.0"]
		build-backend = "poetry.core.masonry.api"