Transition to GitHub Actions for automated testing

.github/workflows/tests.yml

@@ -0,0 +1,84 @@
+name: tests
+
+on: [push, pull_request]
+
+jobs:
+  test-linux:
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python-version: ['3.6', '3.7', '3.8', '3.9']
+    env:
+      DISPLAY: ':99.0'
+
+    steps:
+        - name: Set up virtual framebuffer (xvfb) for Qt GUI testing
+          # https://pytest-qt.readthedocs.io/en/latest/troubleshooting.html#github-actions
+          run: |
+            sudo apt-get install libxkbcommon-x11-0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-xinerama0 libxcb-xfixes0
+            /sbin/start-stop-daemon --start --quiet --pidfile /tmp/custom_xvfb_99.pid --make-pidfile --background --exec /usr/bin/Xvfb -- :99 -screen 0 1920x1200x24 -ac +extension GLX
+
+        - name: Set up Python ${{ matrix.python-version }}
+          run: |
+            echo $CONDA/bin >> $GITHUB_PATH  # prioritize conda over system python
+            conda config --add channels conda-forge
+            conda install -y -q python=${{ matrix.python-version }}
+        #     conda create -y -q -n test-environment python=${{ matrix.python-version }}
+        #     source activate test-environment
+
+        - name: Checkout repository
+          uses: actions/checkout@v2
+
+        - name: Install package from repository
+          run: |
+            pip install -e .
+
+        - name: Install extra depenencies
+          run: |
+            conda install -y -q av
+            pip install -r requirements-tests.txt
+
+        - name: Verify Python version
+          run: |
+            which python
+            python --version
+            python -c "import os, sys; assert sys.version_info[:2] == tuple(map(int, '${{ matrix.python-version }}'.split('.')))[:2]"
+
+        - name: List pip packages
+          run: |
+            pip -V
+            pip list
+
+        - name: List conda packages
+          run: |
+            conda env list
+            conda list
+
+        - name: Run tests
+          run: |
+            nosetests --with-coverage --cover-package=neurotic
+
+        - name: Report coverage to Coveralls
+          run: coveralls
+          env:
+              GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+              COVERALLS_FLAG_NAME: test-linux-${{ matrix.python-version }}
+              COVERALLS_PARALLEL: true
+
+        # - name: Report coverage to Coveralls
+        #   uses: coverallsapp/github-action@master
+        #   with:
+        #     github-token: ${{ secrets.GITHUB_TOKEN }}
+
+  coveralls:
+    name: Finish Coveralls
+    needs: test-linux
+    runs-on: ubuntu-latest
+    container: python:3-slim
+    steps:
+    - name: Finish Coveralls
+      run: |
+        pip3 install --upgrade coveralls
+        coveralls --finish
+      env:
+        GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

README.rst

@@ -3,7 +3,7 @@
 
 *Curate, visualize, annotate, and share your behavioral ephys data using Python*
 
-|PyPI badge| |Anaconda badge| |GitHub badge| |Feedstock badge| |Constructor badge| |Docs badge| |Travis badge| |Azure badge| |Coverage badge| |Zenodo badge| |eNeuro badge|
+|PyPI badge| |Anaconda badge| |GitHub badge| |Feedstock badge| |Constructor badge| |Docs badge| |GitHub Actions badge| |Azure badge| |Coverage badge| |Zenodo badge| |eNeuro badge|
 
 Documentation_ | `Release Notes`_ | `Issue Tracker`_
 
@@ -349,9 +349,9 @@ reference guide, and release notes, see the Documentation_.
     :target: ReadTheDocs_
     :alt: Documentation status
 
-.. |Travis badge| image:: https://img.shields.io/travis/com/jpgill86/neurotic/master.svg?logo=travis-ci&logoColor=white
-    :target: Travis_
-    :alt: Travis build status
+.. |GitHub Actions badge| image:: https://github.com/jpgill86/neurotic/workflows/tests/badge.svg
+    :target: `GitHub Actions`_
+    :alt: Tests status
 
 .. |Azure badge| image:: https://dev.azure.com/conda-forge/feedstock-builds/_apis/build/status/neurotic-feedstock?branchName=master
     :target: `conda-forge CI`_
@@ -386,6 +386,7 @@ reference guide, and release notes, see the Documentation_.
 .. _ephyviewer:     https://github.com/NeuralEnsemble/ephyviewer
 .. _GIN:            https://gin.g-node.org
 .. _GitHub:         https://github.com/jpgill86/neurotic
+.. _GitHub Actions: https://github.com/jpgill86/neurotic/actions
 .. _GitHub Releases: https://github.com/jpgill86/neurotic/releases
 .. _Issue Tracker:  https://github.com/jpgill86/neurotic/issues
 .. _Neo:            https://github.com/NeuralEnsemble/python-neo
@@ -394,6 +395,5 @@ reference guide, and release notes, see the Documentation_.
 .. _PyPI:           https://pypi.org/project/neurotic
 .. _ReadTheDocs:    https://readthedocs.org/projects/neurotic
 .. _Release Notes:  https://neurotic.readthedocs.io/en/latest/releasenotes.html
-.. _Travis:         https://travis-ci.com/jpgill86/neurotic
 .. _User Interface: https://ephyviewer.readthedocs.io/en/latest/interface.html
 .. _Zenodo:         https://doi.org/10.5281/zenodo.3564990

docs/index.rst

@@ -3,7 +3,7 @@
 
 *Curate, visualize, annotate, and share your behavioral ephys data using Python*
 
-|PyPI badge| |Anaconda badge| |GitHub badge| |Feedstock badge| |Constructor badge| |Docs badge| |Travis badge| |Azure badge| |Coverage badge| |Zenodo badge| |eNeuro badge|
+|PyPI badge| |Anaconda badge| |GitHub badge| |Feedstock badge| |Constructor badge| |Docs badge| |GitHub Actions badge| |Azure badge| |Coverage badge| |Zenodo badge| |eNeuro badge|
 
 **Version:** |version| (`other versions`_)
 
@@ -57,9 +57,9 @@ at the same datasets!
     :target: ReadTheDocs_
     :alt: Documentation status
 
-.. |Travis badge| image:: https://img.shields.io/travis/com/jpgill86/neurotic/master.svg?logo=travis-ci&logoColor=white
-    :target: Travis_
-    :alt: Travis build status
+.. |GitHub Actions badge| image:: https://github.com/jpgill86/neurotic/workflows/tests/badge.svg
+    :target: `GitHub Actions`_
+    :alt: Tests status
 
 .. |Azure badge| image:: https://dev.azure.com/conda-forge/feedstock-builds/_apis/build/status/neurotic-feedstock?branchName=master
     :target: `conda-forge CI`_
@@ -89,9 +89,9 @@ at the same datasets!
 .. _eNeuro:         https://doi.org/10.1523/ENEURO.0085-20.2020
 .. _ephyviewer:     https://github.com/NeuralEnsemble/ephyviewer
 .. _GitHub:         https://github.com/jpgill86/neurotic
+.. _GitHub Actions: https://github.com/jpgill86/neurotic/actions
 .. _Neo:            https://github.com/NeuralEnsemble/python-neo
 .. _other versions: https://readthedocs.org/projects/neurotic/versions/
 .. _PyPI:           https://pypi.org/project/neurotic
 .. _ReadTheDocs:    https://readthedocs.org/projects/neurotic
-.. _Travis:         https://travis-ci.com/jpgill86/neurotic
 .. _Zenodo:         https://doi.org/10.5281/zenodo.3564990