Add nibabel to circleCI install

jonescompneurolab · Oct 4, 2023 · 7bebb00 · 7bebb00
1 parent 19ddd02
commit 7bebb00
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Showing 2 changed files with 5 additions and 3 deletions.
diff --git a/.circleci/config.yml b/.circleci/config.yml
@@ -30,7 +30,7 @@ jobs:
                   conda create -n testenv --yes pip python=3.8
                   source activate testenv
                   conda install --yes scipy numpy matplotlib
-                  pip install mne pooch tqdm psutil mpi4py joblib
+                  pip install mne pooch tqdm psutil mpi4py joblib nibabel
 
           - run:
               name: Setup doc building stuff

diff --git a/examples/workflows/plot_simulate_somato.py b/examples/workflows/plot_simulate_somato.py
@@ -22,8 +22,9 @@
 
 ###############################################################################
 # First, we will import the packages needed for computing the inverse solution
-# from the MNE somatosensory dataset. `MNE`_ can be installed with
-# ``pip install mne``, and the somatosensory dataset can be downloaded by
+# from the MNE somatosensory dataset. `MNE`_ (and its dependency `NiBabel`_)
+# can be installed with ``pip install mne nibabel``
+# The somatosensory dataset can be downloaded by
 # importing ``somato`` from ``mne.datasets``.
 import os.path as op
 import matplotlib.pyplot as plt
@@ -271,6 +272,7 @@
 # .. LINKS
 #
 # .. _MNE: https://mne.tools/
+# .. _NiBabel: https://nipy.org/nibabel/
 # .. _HNN ERP tutorial: https://jonescompneurolab.github.io/hnn-tutorials/erp/erp
 # .. _this MNE-python example: https://mne.tools/stable/auto_examples/inverse/plot_label_source_activations.html
 # .. |mne_label_fig| image:: https://user-images.githubusercontent.com/20212206/106524603-cfe75c80-64b0-11eb-9607-3415195c3e7a.png