Updated GWAS analysis and added new oligo pool analysis scripts.

johli · Oct 3, 2022 · dfd1bba · dfd1bba
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diff --git a/analysis/gnomad_v3/gwas_analysis.ipynb → ...sis/gnomad_v3/gwas_catalog_analysis.ipynb b/analysis/gnomad_v3/gwas_analysis.ipynb → ...sis/gnomad_v3/gwas_catalog_analysis.ipynb
diff --git a/analysis/gnomad_v3/gwas_causaldb_comparison.ipynb b/analysis/gnomad_v3/gwas_causaldb_comparison.ipynb
diff --git a/analysis/gnomad_v3/gwas_causaldb_enrichment_analysis.ipynb b/analysis/gnomad_v3/gwas_causaldb_enrichment_analysis.ipynb
diff --git a/analysis/gnomad_v3/gwas_ukbb_comparison.ipynb b/analysis/gnomad_v3/gwas_ukbb_comparison.ipynb
diff --git a/analysis/gnomad_v3/gwas_ukbb_enrichment_analysis.ipynb b/analysis/gnomad_v3/gwas_ukbb_enrichment_analysis.ipynb
diff --git a/data/oligo_pool_2022/medium_library/analyze_library.ipynb b/data/oligo_pool_2022/medium_library/analyze_library.ipynb
diff --git a/data/oligo_pool_2022/medium_library/process_reads_hek293.ipynb b/data/oligo_pool_2022/medium_library/process_reads_hek293.ipynb
diff --git a/data/oligo_pool_2022/medium_library/process_reads_hmc3.ipynb b/data/oligo_pool_2022/medium_library/process_reads_hmc3.ipynb
diff --git a/data/oligo_pool_2022/medium_library/process_reads_sknsh.ipynb b/data/oligo_pool_2022/medium_library/process_reads_sknsh.ipynb