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@biojava @nrnb @mskcc @cBioPortal @knowledgesystems @oncokb @genome-nexus @msk-mind

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  1. cBioPortal/cbioportal cBioPortal/cbioportal Public

    cBioPortal for Cancer Genomics

    Java 662 527

  2. oncokb/oncokb oncokb/oncokb Public

    Java 30 37

  3. cBioPortal/datahub cBioPortal/datahub Public

    A centralized location for storing curated data from cBioPortal

    HTML 175 120

  4. oncokb/oncokb-annotator oncokb/oncokb-annotator Public

    Annotates variants in MAF with OncoKB annotation.

    Python 123 61

  5. genome-nexus/genome-nexus genome-nexus/genome-nexus Public

    Backend server for Genome Nexus

    Java 40 43

  6. knowledgesystems/mutationhotspots knowledgesystems/mutationhotspots Public

    Algorithms to detect mutational hotspots

    Java 9 4