finalized changes for pub, committed long after they were made

paper/figs.md

@@ -0,0 +1,15 @@
+---
+title: "manuscript-figs"
+output:
+  html_document:
+    keep_md: true
+date: "2023-03-09"
+---
+
+
+
+
+```{=html}
+<div class="plotly html-widget html-fill-item-overflow-hidden html-fill-item" id="htmlwidget-5e14113ab9e013a1dfb9" style="width:3150px;height:1125px;"></div>
+<script type="application/json" data-for="htmlwidget-5e14113ab9e013a1dfb9">{"x":{"visdat":{"72882a98636c":["function () ","plotlyVisDat"]},"cur_data":"72882a98636c","attrs":{"72882a98636c":{"alpha_stroke":1,"sizes":[10,100],"spans":[1,20],"type":"scatter","mode":"markers","marker":{"size":25},"size":1,"x":[1,2,3,4,5,6,7,8,9,10],"y":[122.779892307137,122.494094379263,122.681379791568,122.257853049683,121.542115297844,120.487861168997,121.612408052883,121.426539097352,123.355854014555,123.129716403528],"error_y":{"symmetric":false,"arrayminus":[1.41760442790411,0.906518067628653,0.946169024922938,0.911394082724073,0.740853877005819,0.942646862214147,1.26697176403566,0.626964250226308,0.904165445501093,0.727029714789481],"array":[1.41760442790411,0.906518067628653,0.946169024922938,0.911394082724073,0.740853877005819,0.942646862214147,1.26697176403566,0.626964250226308,0.904165445501093,0.727029714789481]},"name":"1","hoverinfo":"text","hovertext":["Mean: 123 (95% CI 121, 124)","Mean: 122 (95% CI 122, 123)","Mean: 123 (95% CI 122, 124)","Mean: 122 (95% CI 121, 123)","Mean: 122 (95% CI 121, 122)","Mean: 120 (95% CI 120, 121)","Mean: 122 (95% CI 120, 123)","Mean: 121 (95% CI 121, 122)","Mean: 123 (95% CI 122, 124)","Mean: 123 (95% CI 122, 124)"],"inherit":true}},"layout":{"margin":{"b":100,"l":50,"t":100,"r":50},"title":{"text":"Systolic blood pressure (SBP), mm Hg<br>","x":0.5},"font":{"size":40},"xaxis":{"domain":[0,1],"automargin":true,"showgrid":false,"showline":true,"tickvals":[1,2,3,4,5,6,7,8,9,10],"ticktext":["1999-2000","2001-2002","2003-2004","2005-2006","2007-2008","2009-2010","2011-2012","2013-2014","2015-2016","2017-2020"],"tickmode":"array","title":"NHANES cycle"},"yaxis":{"domain":[0,1],"automargin":true,"showgrid":false,"showline":true,"ticks":"outside","title":"Systolic blood pressure (SBP), mm Hg"},"hovermode":"closest","showlegend":false},"source":"A","config":{"modeBarButtonsToAdd":["hoverclosest","hovercompare"],"showSendToCloud":false},"data":[{"type":"scatter","mode":"markers","marker":{"color":"rgba(31,119,180,1)","size":25,"sizemode":"area","line":{"color":"rgba(31,119,180,1)"}},"x":[1,2,3,4,5,6,7,8,9,10],"y":[122.779892307137,122.494094379263,122.681379791568,122.257853049683,121.542115297844,120.487861168997,121.612408052883,121.426539097352,123.355854014555,123.129716403528],"error_y":{"color":"rgba(31,119,180,1)","width":55,"symmetric":false,"arrayminus":[1.41760442790411,0.906518067628653,0.946169024922938,0.911394082724073,0.740853877005819,0.942646862214147,1.26697176403566,0.626964250226308,0.904165445501093,0.727029714789481],"array":[1.41760442790411,0.906518067628653,0.946169024922938,0.911394082724073,0.740853877005819,0.942646862214147,1.26697176403566,0.626964250226308,0.904165445501093,0.727029714789481]},"name":"1","hoverinfo":["text","text","text","text","text","text","text","text","text","text"],"hovertext":["Mean: 123 (95% CI 121, 124)","Mean: 122 (95% CI 122, 123)","Mean: 123 (95% CI 122, 124)","Mean: 122 (95% CI 121, 123)","Mean: 122 (95% CI 121, 122)","Mean: 120 (95% CI 120, 121)","Mean: 122 (95% CI 120, 123)","Mean: 121 (95% CI 121, 122)","Mean: 123 (95% CI 122, 124)","Mean: 123 (95% CI 122, 124)"],"textfont":{"size":55},"error_x":{"color":"rgba(31,119,180,1)","width":55},"line":{"color":"rgba(31,119,180,1)","width":55},"xaxis":"x","yaxis":"y","frame":null}],"highlight":{"on":"plotly_click","persistent":false,"dynamic":false,"selectize":false,"opacityDim":0.2,"selected":{"opacity":1},"debounce":0},"shinyEvents":["plotly_hover","plotly_click","plotly_selected","plotly_relayout","plotly_brushed","plotly_brushing","plotly_clickannotation","plotly_doubleclick","plotly_deselect","plotly_afterplot","plotly_sunburstclick"],"base_url":"https://plot.ly"},"evals":[],"jsHooks":[]}</script>
+```

paper/manuscript.Rmd

@@ -663,7 +663,7 @@ tbl_main_2_flex
 
 ### Figure 1: Mean systolic blood pressure for US adults by calendar year
 
-```{r, fig.height=3.75}
+```{r fig_1, fig.height=3.75}
 
 fig_print(fig_main_1)
 
@@ -680,7 +680,7 @@ Dots represent mean systolic blood pressure. Vertical lines represent the 95% co
 
 ### Figure 2: Age-adjusted prevalence of hypertension for US adults by calendar year
 
-```{r, fig.height=3.75}
+```{r fig_2, fig.height=3.75}
 
 fig_print(fig_main_2)
 
@@ -695,7 +695,7 @@ Age adjustment was performed through direct standardization, using the estimated
 
 ### Figure 3: Number of US adults with hypertension by calendar year
 
-```{r}
+```{r fig_3}
 
 fig_print(fig_main_3)
 
@@ -711,7 +711,7 @@ fig_print(fig_main_3)
 ### Figure 4: Age-adjusted prevalence of blood pressure control by calendar year.
 
 A. Among non-pregnant US adults with hypertension `r single_par`
-```{r, fig.height=3.75}
+```{r fig_4a, fig.height=3.75}
 
 fig_print(fig_main_4_a)
 
@@ -727,7 +727,7 @@ Participants with missing values for pregnancy status were assumed to be non-pre
 \newpage
 
 B. Among non-pregnant US adults who self-report taking antihypertensive medication `r single_par`
-```{r, fig.height=3.75}
+```{r fig_4b, fig.height=3.75}
 fig_print(fig_main_4_b)
 ```
 Age adjustment was performed through direct standardization, using the estimated age distribution of US adults with hypertension from 1999 to 2020 as the standard (26.4%, 43.4%, 17.0% and 13.2% being 18 to 44 years, 45 to 64, 65 to 74, and ≥ 75 years of age, respectively) `r single_par`