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Dev/main#138

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rhoadesScholar merged 31 commits intomainjanelia-cellmap/dacapo:mainfrom dev/mainjanelia-cellmap/dacapo:dev/mainCopy head branch name to clipboardFeb 22, 2024

+847-2,245

Commits

Commits on Feb 16, 2024

• overhaul options

  pattonw

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• Merge branch 'dev/main' into options-overhaul

  rhoadesScholar

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• fix: ⚡️ Pass compute context as part of options, and pass options file path as environment variable.

  rhoadesScholar

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• fix: 💩 making options/config serializable

  neptunes5thmoon

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• Merge branch '57-parallel-blockwise-processing' of github.com:janelia-cellmap/dacapo into 57-parallel-blockwise-processing

  rhoadesScholar

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• Remove unused code in options.py

  rhoadesScholar

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• 🎨 Format Python code with psf/black

  rhoadesScholar

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• Dev/main (#132)

  rhoadesScholar

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• Merge branch '57-parallel-blockwise-processing' into actions/black

  rhoadesScholar

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• Format Python code with psf/black push (#131)

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  rhoadesScholar

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• Merge branch '57-parallel-blockwise-processing' of github.com:janelia-cellmap/dacapo into 57-parallel-blockwise-processing

  rhoadesScholar

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• fix: 🧪 Fix test_apply

  rhoadesScholar

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Commits on Feb 19, 2024

• fix: 🧪 Working on tests. All "components" are passing.

  rhoadesScholar

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• fix: ✅ Testing train passes.

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  rhoadesScholar

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• fix: 🐛 Fixed test_options for no_config

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  rhoadesScholar

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• fix: 🚧 Work to fix test_predict.

  rhoadesScholar

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Commits on Feb 20, 2024

• fix: 🚧 Some cleanup, but still failing test_predict.

  rhoadesScholar

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• fix: 🚧 Debug predict_worker.py

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  rhoadesScholar

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• Remove commented out code for daisy case in predict_worker.py

  rhoadesScholar

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Commits on Feb 21, 2024

• fix: 🐛 Passed test_predict.py

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  rhoadesScholar

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• fix: 🧪 Fix imports. test_apply.py passes

  rhoadesScholar

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• fix: 🐛 Fix abstract ConfigStore to allow MongoConfigStore definition.

  rhoadesScholar

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Commits on Feb 22, 2024

• fix: 🚧 Extend prediction output declaration, refactor, debug tests, and debug validate.

  rhoadesScholar

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  c1b7f8a

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• chore: 🧑‍💻 Clean imports.

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  rhoadesScholar

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• Merge branch 'dev/main' into dev/tests

  rhoadesScholar

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  0aae770

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• Revert "Docstrings"

  rhoadesScholar

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• Revert "Docstrings" (#137)

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  rhoadesScholar

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• Merge branch 'dev/main' into dev/tests

  rhoadesScholar

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• Merge branch 'dev/tests' of github.com:janelia-cellmap/dacapo into dev/tests

  rhoadesScholar

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• chore: 🔥 Cleaning

  rhoadesScholar

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• Dev/tests (#134)

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  rhoadesScholar

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