Connect to chimera13
srun --pty --ntasks=2 -p DGXA100 --mem=256G -w chimera13 -t 2-24 /bin/bash
Install miniconda, then install the RISTER environment:
conda env create -f RISTER.yml
conda activate RISTER
Then run the convert.py script:
cd Neuroglancer
mkdir OUTPUTFOLDER
./convert.py ORIGINALFOLDER OUTPUTFOLDER