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ionides committed Mar 29, 2024
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\begin{reflist}{WORKING PAPERS}

\item Li, J., Ionides, E. L., King, A. A., Pascual, M. and Ning, N. (2023). Machine Learning for Mechanistic Models of Metapopulation Dynamics. {\it arxiv:2311.06702}.
\item Li, J., Ionides, E. L., King, A. A., Pascual, M. and Ning, N. (2023). Inference on spatiotemporal dynamics for networks of biological populations. {\it arxiv:2311.06702}.

\item Wheeler, J., Rosengart, A. L., Jiang, Z., Tan, K., Treutle,
N. and Ionides, E. L. (2023). Informing policy via dynamic models: Cholera in Haiti. {\it arxiv:2301.08979}.
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Queen's University, Ontario;
University of British Columbia;
University of California, Berkeley;
University of Pennsylvania;
University of Toronto, Ontario;
University of Turku, Finland;
University of Wisconsin, Madison.

\end{mylist}
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\begin{mylist}{OTHER PROFESSIONAL SERVICE}

\item{\bf 2024 } Organizer for an invited session on {\it Inference for partially observed structured dynamic systems} at IMS Asia Pacific Rim meeting, Melbourne, Australia.

\item{\bf 2018-2023 } Advisory board for EPSRC grant {\it New Approaches to Bayesian Data Science: Tackling Challenges from the Health Sciences} (PI, Paul Fearnhead).

\item{\bf 2019 } Instructor for a short course on {\it Partially observed systems: combining data with science} at University of Michigan.
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\begin{reflist}{POSTDOCTORAL FELLOWS}

\item{Brandon Legried } (2020-2022). NSF trainee on {\it Understanding dynamic big data with complex structure}, working on inferring population dynamics from genetic sequence data.

\item{Patricia (Ning) Ning } (2019-2022). NSF/NIH funded project on {\it Urban vector-borne disease transmission demands advances in spatiotemporal statistical inference}.
\item{Patricia (Ning) Ning } (2019-2022). NSF/NIH funded project on {\it Urban vector-borne disease transmission demands advances in spatiotemporal statistical inference}. Now an assistant professor at Texas A\&M University.

\item{Qianying Lin } (2019-2022). Michigan Institute for Data Science Institute fellowship on {\it Phylodynamic inference with applications to epidemiology}. Current. Jointly supervised with Aaron King.

\item{Kevin Bakker} (2018-2020). NIH postdoctoral fellowship on {\it Uncovering the Mechanisms Driving Seasonal Polio Incidence: A Modeling Approach Towards Endgame Strategies}. Jointly supervised with Mercedes Pascual. Now Assistant Research Scientist at University of Michigan.
\item{Brandon Legried } (2020-2022). NSF trainee on {\it Understanding dynamic big data with complex structure}, working on inferring population dynamics from genetic sequence data. Jointly supervised with Jonathan Terhorst. Now a visiting assistant professor at Georgia Tech.

\item{Qianying Lin } (2019-2022). Michigan Institute for Data Science Institute fellowship on {\it Phylodynamic inference with applications to epidemiology}. Jointly supervised with Aaron King. Now a research scientist at Los Alamos National Laboratories.

\item{Kevin Bakker} (2018-2020). NIH postdoctoral fellowship on {\it Uncovering the Mechanisms Driving Seasonal Polio Incidence: A Modeling Approach Towards Endgame Strategies}. Jointly supervised with Mercedes Pascual. Now Principal Scientist at Merck.

\item{Carles Bret\'{o}} (2015-2018). NIH-funded project on {\it X-Raying High-Dimensional Infectious disease} as part of the Center for Inference and Dynamics of Infectious Diseases . Jointly supervised with Aaron King. Now Assistant Professor of Economics at University of Valencia, Spain.
\item{Carles Bret\'{o}} (2015-2018). NIH-funded project on {\it X-Raying High-Dimensional Infectious disease} as part of the Center for Inference and Dynamics of Infectious Diseases . Jointly supervised with Aaron King. Now Associate Professor of Economics at University of Valencia, Spain.

\item{John Marino} (2015-2016). NSF postdoctoral fellowship on {\it Enhancement of ecological inference and forecasting, with applications to critical threats facing Great Lakes fisheries}. Jointly supervised with Scott Peacor. Now Assistant Professor of Biology at Bradley University.
\item{John Marino} (2015-2016). NSF postdoctoral fellowship on {\it Enhancement of ecological inference and forecasting, with applications to critical threats facing Great Lakes fisheries}. Jointly supervised with Scott Peacor. Now Associate Professor of Biology at Bradley University.

\end{reflist}

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Derek Hansen \>2023\> Statistics\\
James Henderson \>2015 \> Statistics\\
Christopher Henry \> 2017 \> Epidemiology\\
Cheoljoon Jeong \> current \> Industrial and Operations Engineering\\
Yu-Han Kao \> 2018 \> Epidemiology\\
Roxanne Katus \>2014 \> Atmospheric, Oceanic \& Space Sciences\\
Dong-Yun Kim \>2003 \> Statistics\\
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Peter Larsen \>2013 \> Epidemiology\\
Sheng Li \>2011 \>Epidemiology\\
Timothy Lycurgus \>2021 \> Statistics\\
Declan McNamara \> current \> Statistics\\
Olga Marchenko \>2012 \> Statistics\\
Bryan Mayer \>2011 \> Biostatistics\\
Bryan Moyers \>2017\> Bioinformatics\\
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Akarin Phaibulpanich \>2006 \> Statistics\\
Clara Shaw \>2019\> Ecology \& Evolutionary Biology\\
Krithika Suresh \> 2018 \> Biostatistics\\
Hannah Van Wyk \> current \> Epidemiology\\
Natalya Verbitsky \> 2006 \> Statistics\\
Victor Verma \> current \> Statistics\\
Kam Chung Wong \> 2017 \> Statistics\\
Azadeh Yazdan \> 2010 \> Bio-Engineering\\
Xubo Yue \> 2023 \> Industrial and operations engineering\\
Xubo Yue \> 2023 \> Industrial and Operations Engineering\\
Xinyu Zhang \> 2017 \> Epidemiology \\
\end{tabbing}


\end{mylist}

\lsp
\begin{reflist}{UNDERGRADUATE RESEARCH PROJECTS}

\begin{reflist}{UNDERGRADUATE RESEARCH}
\item{Kevin Tan}. Differentiable Plug-and-Play Particle Filtering. Honors thesis (2023).
\item{Zuyuan Han}. Signature Methods in Variance Swap Pricing. Honors thesis, co-advised with Bingyan Han (2023).
\item{Bo Yang}. Analysis of Panel Data via Mechanistic Models in a PanelPOMP Framework. Honors thesis (2023).
\item{Yize Hao and Mingyuan Li}. Modeling Measles in Multiple Cities. Research project (2023).
\item{Kevin Tan and Noah Treutle}. On the Transmissibility of Cholera During the 2010-2019 Haiti Cholera Epidemic. Research project (2022).
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\begin{mylist}{SEMINARS, PRESENTATIONS AND WORKSHOPS}
\setlength{\itemsep}{0.15 cm}


\item{\bf 2023 } Workshop on {\it Design and Analysis of Infectious Disease Studies}, Mathematisches Forschungsinstitut Oberwolfach, Germany; invited speaker.

\item{\bf 2022} IMS annual meeting, London, UK; invited speaker.
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