Code

Lightning pose (#22)#23

Code

Merged

themattinthehatt merged 60 commits intomasterint-brain-lab/iblvideo:masterfrom litposeint-brain-lab/iblvideo:litposeCopy head branch name to clipboardJan 14, 2025

+2,291-259

Commits

Commits on Apr 25, 2023

• rename choiceworld

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  e04d6ec

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• empty files and functions

  juhuntenburg

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  7c8f15d

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• fix poor refactoring

  juhuntenburg

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• end of hackathon progress for litpose

  themattinthehatt

  committed
  2b27d6b

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Commits on Jun 23, 2023

• rename choiceworld

  

  juhuntenburg

  authored and

  themattinthehatt

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• empty files and functions

  

  juhuntenburg

  authored and

  themattinthehatt

  committed
  78bf4ba

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• fix poor refactoring

  

  juhuntenburg

  authored and

  themattinthehatt

  committed
  599d63d

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• end of hackathon progress for litpose

  themattinthehatt

  committed
  92698c2

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• litpose for roi network

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  committed
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• litpose for specialized networks (left view only)

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Commits on Jun 27, 2023

• consolidate network locations

  themattinthehatt

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  9c3e15a

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• remove need to build data modules

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• litpose for specialized networks (right view)

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Commits on Jun 28, 2023

• update docstrings

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• update README

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• litpose for body cam

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• add litpose unit test

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Commits on Jul 13, 2023

• correct file name

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Commits on Jul 14, 2023

• julia run

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• small update readme

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Commits on Jul 25, 2023

• pupil ensembling with eks

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Commits on Aug 8, 2023

• type fix

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  6cd1e61

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Commits on Apr 16, 2024

• Lightning pose (#22)

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  3 peopleauthored
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Commits on Apr 17, 2024

• simplify install

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Commits on Apr 22, 2024

• small change README

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  717fba1

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Commits on Apr 23, 2024

• fix network download

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Commits on Apr 24, 2024

• fix for lp tests to work on cortexlab

  juhuntenburg

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  d1b2d4e

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• update lp test data download

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Commits on Apr 26, 2024

• update dev instructions

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  c60204a

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• fix circular import

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• fix more circular import

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• now fix missing imports

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Commits on Jun 21, 2024

• update eks to run on paws

  themattinthehatt

  committed
  31e7b1c

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• Merge branch 'lightning_pose' into litpose

  themattinthehatt

  committed
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• matt+julia branch merge cleanup

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  committed
  0292e06

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• accommodate eks updates

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  committed
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Commits on Jun 27, 2024

• pip install eks

  themattinthehatt

  committed
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Commits on Jul 31, 2024

• LP v1.5.0 updates

  themattinthehatt

  committed
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• LP v1.5.1 updates

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Commits on Dec 9, 2024

• Merge remote-tracking branch 'origin/master' into litpose

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  committed
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Commits on Dec 13, 2024

• update to work with LP v1.6.1 and EKS v3.0.0

  themattinthehatt

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• fix cropping function to work with new LP bboxes

  themattinthehatt

  committed
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Commits on Dec 16, 2024

• lp integration test updates

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  committed
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• add global variance inflation for EKS paw

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Commits on Dec 17, 2024

• update README

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Commits on Dec 18, 2024

• update weight/data versions for LP and motion energy

  themattinthehatt

  committed
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• streamline AWS downloading and LP tests

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  committed
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• update network versions

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  committed
  d1fe2e7

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• make lp tests more robust to failure

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Commits on Dec 19, 2024

• DLC updates

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  b6b2e4f

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• remove LP import from __init__

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  committed
  86c266a

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• AWS download bugfix

  themattinthehatt

  committed
  2a74d30

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• rename 'pose_dlc' module back to 'choiceworld' for backwards compatibility

  themattinthehatt

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• dynamically update paw smoothing param based on framerate

  themattinthehatt

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• flip eks outputs as well as ens medians

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• disable lightning logs

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  committed
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• further optimize batch sizes

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• make tests robust to memory leaks by using multiprocessing

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Commits on Jan 10, 2025

• updates to address Mayo's PR comments

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• "lit" -> "lp" in files and functions for easier cross-referencing

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