add setup-r-dependencies (#274) #993
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| --- | |
| name: Check 🛠 | |
| on: | |
| pull_request: | |
| types: | |
| - opened | |
| - synchronize | |
| - reopened | |
| - ready_for_review | |
| branches: | |
| - main | |
| push: | |
| branches: | |
| - main | |
| workflow_dispatch: | |
| jobs: | |
| audit: | |
| name: Audit Dependencies 🕵️♂️ | |
| uses: insightsengineering/r.pkg.template/.github/workflows/audit.yaml@main | |
| r-cmd: | |
| name: R CMD Check 🧬 | |
| uses: insightsengineering/r.pkg.template/.github/workflows/build-check-install.yaml@main | |
| secrets: | |
| REPO_GITHUB_TOKEN: ${{ secrets.REPO_GITHUB_TOKEN }} | |
| with: | |
| additional-env-vars: | | |
| _R_CHECK_CRAN_INCOMING_REMOTE_=false | |
| TESTING_DEPTH=5 | |
| additional-r-cmd-check-params: --as-cran | |
| enforce-note-blocklist: true | |
| note-blocklist: | | |
| checking dependencies in R code .* NOTE | |
| checking R code for possible problems .* NOTE | |
| checking examples .* NOTE | |
| checking Rd line widths .* NOTE | |
| checking S3 generic/method consistency .* NOTE | |
| checking Rd .usage sections .* NOTE | |
| checking for unstated dependencies in vignettes .* NOTE | |
| checking top-level files .* NOTE | |
| unit-test-report-brand: >- | |
| https://raw.githubusercontent.com/insightsengineering/hex-stickers/main/thumbs/teal.png | |
| deps-installation-method: setup-r-dependencies | |
| lookup-refs: | | |
| insightsengineering/formatters | |
| insightsengineering/rtables | |
| r-cmd-non-cran: | |
| name: R CMD Check (non-CRAN) 🧬 | |
| uses: insightsengineering/r.pkg.template/.github/workflows/build-check-install.yaml@main | |
| secrets: | |
| REPO_GITHUB_TOKEN: ${{ secrets.REPO_GITHUB_TOKEN }} | |
| with: | |
| additional-env-vars: | | |
| NOT_CRAN=true | |
| TESTING_DEPTH=5 | |
| enforce-note-blocklist: true | |
| concurrency-group: non-cran | |
| unit-test-report-directory: unit-test-report-non-cran | |
| note-blocklist: | | |
| checking dependencies in R code .* NOTE | |
| checking R code for possible problems .* NOTE | |
| checking examples .* NOTE | |
| checking Rd line widths .* NOTE | |
| checking S3 generic/method consistency .* NOTE | |
| checking Rd .usage sections .* NOTE | |
| checking for unstated dependencies in vignettes .* NOTE | |
| checking top-level files .* NOTE | |
| deps-installation-method: setup-r-dependencies | |
| lookup-refs: | | |
| insightsengineering/formatters | |
| insightsengineering/rtables | |
| coverage: | |
| name: Coverage 📔 | |
| uses: insightsengineering/r.pkg.template/.github/workflows/test-coverage.yaml@main | |
| secrets: | |
| REPO_GITHUB_TOKEN: ${{ secrets.REPO_GITHUB_TOKEN }} | |
| with: | |
| additional-env-vars: | | |
| NOT_CRAN=true | |
| deps-installation-method: setup-r-dependencies | |
| lookup-refs: | | |
| insightsengineering/formatters | |
| insightsengineering/rtables | |
| linter: | |
| if: github.event_name != 'push' | |
| name: SuperLinter 🦸♀️ | |
| uses: insightsengineering/r.pkg.template/.github/workflows/linter.yaml@main | |
| roxygen: | |
| name: Roxygen 🅾 | |
| uses: insightsengineering/r.pkg.template/.github/workflows/roxygen.yaml@main | |
| secrets: | |
| REPO_GITHUB_TOKEN: ${{ secrets.REPO_GITHUB_TOKEN }} | |
| with: | |
| auto-update: true | |
| deps-installation-method: setup-r-dependencies | |
| lookup-refs: | | |
| insightsengineering/formatters | |
| insightsengineering/rtables | |
| gitleaks: | |
| name: gitleaks 💧 | |
| uses: insightsengineering/r.pkg.template/.github/workflows/gitleaks.yaml@main | |
| spelling: | |
| name: Spell Check 🆎 | |
| uses: insightsengineering/r.pkg.template/.github/workflows/spelling.yaml@main | |
| secrets: | |
| REPO_GITHUB_TOKEN: ${{ secrets.REPO_GITHUB_TOKEN }} | |
| links: | |
| if: github.event_name != 'push' | |
| name: Check URLs 🌐 | |
| uses: insightsengineering/r.pkg.template/.github/workflows/links.yaml@main | |
| vbump: | |
| name: Version Bump 🤜🤛 | |
| if: github.event_name == 'push' | |
| uses: insightsengineering/r.pkg.template/.github/workflows/version-bump.yaml@main | |
| secrets: | |
| REPO_GITHUB_TOKEN: ${{ secrets.REPO_GITHUB_TOKEN }} | |
| version: | |
| name: Version Check 🏁 | |
| uses: insightsengineering/r.pkg.template/.github/workflows/version.yaml@main | |
| licenses: | |
| name: License Check 🃏 | |
| uses: insightsengineering/r.pkg.template/.github/workflows/licenses.yaml@main | |
| style: | |
| if: github.event_name != 'push' | |
| name: Style Check 👗 | |
| uses: insightsengineering/r.pkg.template/.github/workflows/style.yaml@main | |
| with: | |
| auto-update: true | |
| secrets: | |
| REPO_GITHUB_TOKEN: ${{ secrets.REPO_GITHUB_TOKEN }} | |
| grammar: | |
| if: github.event_name != 'push' | |
| name: Grammar Check 🔤 | |
| uses: insightsengineering/r.pkg.template/.github/workflows/grammar.yaml@main |