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Wave 4 -
tm_t_events
shinytests (#1157)
Part of #1108 --------- Co-authored-by: unknown <[email protected]>
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app_driver_tm_t_events <- function() { | ||
data <- teal.data::teal_data() | ||
data <- within(data, { | ||
ADSL <- teal.data::rADSL | ||
ADAE <- teal.data::rADAE | ||
}) | ||
datanames <- c("ADSL", "ADAE") | ||
teal.data::datanames(data) <- datanames | ||
teal.data::join_keys(data) <- teal.data::default_cdisc_join_keys[datanames] | ||
|
||
init_teal_app_driver( | ||
data = data, | ||
modules = tm_t_events( | ||
label = "Adverse Event Table", | ||
dataname = "ADAE", | ||
parentname = "ADSL", | ||
arm_var = teal.transform::choices_selected(c("ARM", "ARMCD"), "ARM"), | ||
llt = teal.transform::choices_selected( | ||
choices = teal.transform::variable_choices(data[["ADAE"]], c("AETERM", "AEDECOD")), | ||
selected = c("AEDECOD") | ||
), | ||
hlt = teal.transform::choices_selected( | ||
choices = teal.transform::variable_choices(data[["ADAE"]], c("AEBODSYS", "AESOC")), | ||
selected = "AEBODSYS" | ||
), | ||
add_total = TRUE, | ||
event_type = "adverse event", | ||
total_label = default_total_label(), | ||
na_level = default_na_str(), | ||
sort_criteria = c("freq_desc", "alpha"), | ||
sort_freq_col = default_total_label(), | ||
prune_freq = 0, | ||
prune_diff = 0, | ||
drop_arm_levels = TRUE, | ||
incl_overall_sum = TRUE, | ||
pre_output = NULL, | ||
post_output = NULL, | ||
basic_table_args = teal.widgets::basic_table_args() | ||
) | ||
) | ||
} | ||
|
||
testthat::test_that("e2e - tm_t_events: Module initializes in teal without errors and produces table output.", { | ||
skip_if_too_deep(5) | ||
app_driver <- app_driver_tm_t_events() | ||
app_driver$expect_no_shiny_error() | ||
app_driver$expect_no_validation_error() | ||
testthat::expect_true( | ||
app_driver$is_visible(app_driver$active_module_element("table-table-with-settings")) | ||
) | ||
app_driver$stop() | ||
}) | ||
|
||
testthat::test_that( | ||
"e2e - tm_t_events: Starts with specified label, arm_var, hlt, llt, sort_criteria, | ||
prune_freq, prune_diff, add_total, drop_arm_levels.", | ||
{ | ||
skip_if_too_deep(5) | ||
app_driver <- app_driver_tm_t_events() | ||
|
||
testthat::expect_equal( | ||
app_driver$get_text("#teal-main_ui-root-active_tab > li.active > a"), | ||
"Adverse Event Table" | ||
) | ||
testthat::expect_equal( | ||
app_driver$get_active_module_input("arm_var-dataset_ADSL_singleextract-select"), | ||
"ARM" | ||
) | ||
testthat::expect_equal( | ||
app_driver$get_active_module_input("hlt-dataset_ADAE_singleextract-select"), | ||
"AEBODSYS" | ||
) | ||
testthat::expect_equal( | ||
app_driver$get_active_module_input("llt-dataset_ADAE_singleextract-select"), | ||
"AEDECOD" | ||
) | ||
testthat::expect_equal( | ||
app_driver$get_active_module_input("sort_criteria"), | ||
"freq_desc" | ||
) | ||
testthat::expect_equal( | ||
app_driver$get_active_module_input("prune_freq"), | ||
0 | ||
) | ||
testthat::expect_equal( | ||
app_driver$get_active_module_input("prune_diff"), | ||
0 | ||
) | ||
testthat::expect_true(app_driver$get_active_module_input("add_total")) | ||
testthat::expect_true(app_driver$get_active_module_input("drop_arm_levels")) | ||
app_driver$stop() | ||
} | ||
) | ||
|
||
testthat::test_that( | ||
"e2e - tm_t_events: Selecting arm_var-variable changes the table and does not throw validation errors.", | ||
{ | ||
skip_if_too_deep(5) | ||
app_driver <- app_driver_tm_t_events() | ||
table_before <- app_driver$get_active_module_tws_output("table") | ||
app_driver$set_active_module_input("arm_var-dataset_ADSL_singleextract-select", "ARMCD") | ||
testthat::expect_false(identical(table_before, app_driver$get_active_module_tws_output("table"))) | ||
app_driver$expect_no_validation_error() | ||
app_driver$stop() | ||
} | ||
) | ||
|
||
testthat::test_that("e2e - tm_t_events: Deselection of arm_var-variable throws validation error.", { | ||
skip_if_too_deep(5) | ||
app_driver <- app_driver_tm_t_events() | ||
app_driver$set_active_module_input("arm_var-dataset_ADSL_singleextract-select", NULL) | ||
testthat::expect_identical(app_driver$get_active_module_tws_output("table"), data.frame()) | ||
app_driver$expect_validation_error() | ||
testthat::expect_equal( | ||
app_driver$active_module_element_text("arm_var-dataset_ADSL_singleextract-select_input .shiny-validation-message"), | ||
"Please select 1 or 2 treatment variable values" | ||
) | ||
app_driver$stop() | ||
}) | ||
|
||
testthat::test_that( | ||
"e2e - tm_t_events: Selecting hlt-variable changes the table and does not throw validation errors.", | ||
{ | ||
skip_if_too_deep(5) | ||
app_driver <- app_driver_tm_t_events() | ||
table_before <- app_driver$get_active_module_tws_output("table") | ||
app_driver$set_active_module_input("hlt-dataset_ADAE_singleextract-select", "AESOC") | ||
testthat::expect_false(identical(table_before, app_driver$get_active_module_tws_output("table"))) | ||
app_driver$expect_no_validation_error() | ||
app_driver$stop() | ||
} | ||
) | ||
|
||
testthat::test_that( | ||
"e2e - tm_t_events: Deselection of hlt-variable changes the table and does not throw validation errors.", | ||
{ | ||
skip_if_too_deep(5) | ||
app_driver <- app_driver_tm_t_events() | ||
table_before <- app_driver$get_active_module_tws_output("table") | ||
app_driver$set_active_module_input("hlt-dataset_ADAE_singleextract-select", NULL) | ||
testthat::expect_false(identical(table_before, app_driver$get_active_module_tws_output("table"))) | ||
app_driver$expect_no_validation_error() | ||
app_driver$stop() | ||
} | ||
) | ||
|
||
testthat::test_that( | ||
"e2e - tm_t_events: Selecting llt-variable changes the table and does not throw validation errors.", | ||
{ | ||
skip_if_too_deep(5) | ||
app_driver <- app_driver_tm_t_events() | ||
table_before <- app_driver$get_active_module_tws_output("table") | ||
app_driver$set_active_module_input("llt-dataset_ADAE_singleextract-select", "AETERM") | ||
testthat::expect_false(identical(table_before, app_driver$get_active_module_tws_output("table"))) | ||
app_driver$expect_no_validation_error() | ||
app_driver$stop() | ||
} | ||
) | ||
|
||
testthat::test_that( | ||
"e2e - tm_t_events: Deselection of llt-variable changes the table and does not throw validation errors.", | ||
{ | ||
skip_if_too_deep(5) | ||
app_driver <- app_driver_tm_t_events() | ||
table_before <- app_driver$get_active_module_tws_output("table") | ||
app_driver$set_active_module_input("llt-dataset_ADAE_singleextract-select", NULL) | ||
testthat::expect_false(identical(table_before, app_driver$get_active_module_tws_output("table"))) | ||
app_driver$expect_no_validation_error() | ||
app_driver$stop() | ||
} | ||
) |