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Update surv_time table snapshots (#78)
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Align all snapshots with
insightsengineering/tlg-catalog#145
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@edelarua
edelarua authored Nov 7, 2023
1 parent a29b7c7 commit bfbed11
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12 changes: 4 additions & 8 deletions tests/testthat/_snaps/table_dort01.md
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Median 5.3 6.2 5.3
95% CI (4.6, 5.8) (5.4, 6.3) (4.6, 5.8)
25% and 75%-ile 3.8, 6.3 4.6, 6.4 4.0, 6.1
Range (censored) 3.6 to 6.3 3.3 to 6.5 3.3 to 6.4
Range (event) 0.5 to 6.4 0.9 to 6.5 0.6 to 6.6
Range 0.5 to 6.4 0.9 to 6.5 0.6 to 6.6
12 Months duration
Patients remaining at risk NA NA NA
Event Free Rate (%) NA NA NA
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Median 5.3 6.2 5.3
95% CI (4.6, 5.8) (5.4, 6.3) (4.6, 5.8)
25% and 75%-ile 3.8, 6.3 4.6, 6.4 4.0, 6.1
Range (censored) 3.6 to 6.3 3.3 to 6.5 3.3 to 6.4
Range (event) 0.5 to 6.4 0.9 to 6.5 0.6 to 6.6
Range 0.5 to 6.4 0.9 to 6.5 0.6 to 6.6
Unstratified Analysis
p-value (log-rank) 0.0223 0.6659
Hazard Ratio 0.60 0.90
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Median 5.3 6.2 5.3
90% CI (4.6, 5.8) (5.5, 6.3) (4.6, 5.7)
25% and 75%-ile 3.8, 6.3 4.6, 6.4 4.0, 6.1
Range (censored) 3.6 to 6.3 3.3 to 6.5 3.3 to 6.4
Range (event) 0.5 to 6.4 0.9 to 6.5 0.6 to 6.6
Range 0.5 to 6.4 0.9 to 6.5 0.6 to 6.6
12 Months duration
Patients remaining at risk NA NA NA
Event Free Rate (%) NA NA NA
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Median 5.3 6.2 5.3
95% CI (4.6, 5.8) (5.4, 6.3) (4.6, 5.8)
25% and 75%-ile 3.8, 6.3 4.6, 6.4 4.0, 6.1
Range (censored) 3.6 to 6.3 3.3 to 6.5 3.3 to 6.4
Range (event) 0.5 to 6.4 0.9 to 6.5 0.6 to 6.6
Range 0.5 to 6.4 0.9 to 6.5 0.6 to 6.6
6 Months duration
Patients remaining at risk 10 18 7
Event Free Rate (%) 33.46 50.23 30.56
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108 changes: 63 additions & 45 deletions tests/testthat/_snaps/table_lbt11.md
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Code
res
Output
ARM A ARM B ARM C
(N=134) (N=134) (N=132)
———————————————————————————————————————————————————————————————————————————————
Patients with LLT event (%) 20 (14.9%) 9 (6.7%) 9 (6.8%)
Patients without LLT event (%) 114 (85.1%) 125 (93.3%) 123 (93.2%)
Time to 1st LLT Event (DAYS)
Median NA NA 728.0
95% CI NA (724.0, NA) NA
25% and 75%-ile 618.0, NA 724.0, NA 728.0, 728.0
Range (censored) 1.0 to 731.0 1.0 to 728.0 1.0 to 722.0
Range (event) 34.0 to 666.0 139.0 to 724.0 10.0 to 728.0
Unstratified Analysis
p-value (log-rank) 0.0295 0.1687
Hazard Ratio 0.43 0.58
95% CI (0.19, 0.94) (0.26, 1.27)
ARM A ARM B ARM C
(N=134) (N=134) (N=132)
———————————————————————————————————————————————————————————————————————————————————————
Patients with LLT event (%) 20 (14.9%) 9 (6.7%) 9 (6.8%)
Patients without LLT event (%) 114 (85.1%) 125 (93.3%) 123 (93.2%)
Time to 1st LLT Event (DAYS)
Median NA NA 728.0
95% CI NA (724.0, NA) NA
25% and 75%-ile 618.0, NA 724.0, NA 728.0, 728.0
Range 1.0 to 731.0 {1} 1.0 to 728.0 {2} 1.0 to 728.0 {3}
Unstratified Analysis
p-value (log-rank) 0.0295 0.1687
Hazard Ratio 0.43 0.58
95% CI (0.19, 0.94) (0.26, 1.27)
———————————————————————————————————————————————————————————————————————————————————————
{1} - Censored observations: range minimum & maximum
{2} - Censored observations: range minimum & maximum
{3} - Censored observation: range minimum
———————————————————————————————————————————————————————————————————————————————————————

# LBT11 variant 2 works as expected

Code
res
Output
ARM A ARM B ARM C
(N=134) (N=134) (N=132)
———————————————————————————————————————————————————————————————————————————————
Patients with LLT event (%) 20 (14.9%) 9 (6.7%) 9 (6.8%)
Patients without LLT event (%) 114 (85.1%) 125 (93.3%) 123 (93.2%)
Time to 1st LLT Event (DAYS)
Median NA NA 728.0
95% CI NA (724.0, NA) NA
25% and 75%-ile 618.0, NA 724.0, NA 728.0, 728.0
Range (censored) 1.0 to 731.0 1.0 to 728.0 1.0 to 722.0
Range (event) 34.0 to 666.0 139.0 to 724.0 10.0 to 728.0
ARM A ARM B ARM C
(N=134) (N=134) (N=132)
———————————————————————————————————————————————————————————————————————————————————————
Patients with LLT event (%) 20 (14.9%) 9 (6.7%) 9 (6.8%)
Patients without LLT event (%) 114 (85.1%) 125 (93.3%) 123 (93.2%)
Time to 1st LLT Event (DAYS)
Median NA NA 728.0
95% CI NA (724.0, NA) NA
25% and 75%-ile 618.0, NA 724.0, NA 728.0, 728.0
Range 1.0 to 731.0 {1} 1.0 to 728.0 {2} 1.0 to 728.0 {3}
———————————————————————————————————————————————————————————————————————————————————————
{1} - Censored observations: range minimum & maximum
{2} - Censored observations: range minimum & maximum
{3} - Censored observation: range minimum
———————————————————————————————————————————————————————————————————————————————————————

# LBT11 variant 3 works as expected

Code
res
Output
ARM A ARM B ARM C
(N=134) (N=134) (N=132)
———————————————————————————————————————————————————————————————————————————————
Patients with LLT event (%) 20 (14.9%) 9 (6.7%) 9 (6.8%)
Patients without LLT event (%) 114 (85.1%) 125 (93.3%) 123 (93.2%)
Time to 1st LLT Event (DAYS)
Median NA NA 728.0
95% CI NA (724.0, NA) NA
25% and 75%-ile 618.0, NA 724.0, NA 728.0, 728.0
Range (censored) 1.0 to 731.0 1.0 to 728.0 1.0 to 722.0
Range (event) 34.0 to 666.0 139.0 to 724.0 10.0 to 728.0
Unstratified Analysis
p-value (log-rank) 0.0295 0.1687
Hazard Ratio 0.43 0.58
95% CI (0.19, 0.94) (0.26, 1.27)
Stratified By: RACE, SEX
p-value (log-rank) 0.0858 0.1605
Hazard Ratio 0.51 0.57
95% CI (0.23, 1.12) (0.26, 1.26)
ARM A ARM B ARM C
(N=134) (N=134) (N=132)
———————————————————————————————————————————————————————————————————————————————————————
Patients with LLT event (%) 20 (14.9%) 9 (6.7%) 9 (6.8%)
Patients without LLT event (%) 114 (85.1%) 125 (93.3%) 123 (93.2%)
Time to 1st LLT Event (DAYS)
Median NA NA 728.0
95% CI NA (724.0, NA) NA
25% and 75%-ile 618.0, NA 724.0, NA 728.0, 728.0
Range 1.0 to 731.0 {1} 1.0 to 728.0 {2} 1.0 to 728.0 {3}
Unstratified Analysis
p-value (log-rank) 0.0295 0.1687
Hazard Ratio 0.43 0.58
95% CI (0.19, 0.94) (0.26, 1.27)
Stratified By: RACE, SEX
p-value (log-rank) 0.0858 0.1605
Hazard Ratio 0.51 0.57
95% CI (0.23, 1.12) (0.26, 1.26)
———————————————————————————————————————————————————————————————————————————————————————
{1} - Censored observations: range minimum & maximum
{2} - Censored observations: range minimum & maximum
{3} - Censored observation: range minimum
———————————————————————————————————————————————————————————————————————————————————————

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