Clean up documentation (#849)

Closes #848

.Rbuildignore

@@ -29,10 +29,6 @@
 ~$
 ^vignettes/dev-guide$
 pkgdown
-inst/extdata/Advanced_rtables_part1.pdf
-inst/extdata/Advances_rtables_part2.pdf
-inst/extdata/Clinical_Trial_Reporting_Tables_in_R.pdf
-inst/extdata/r_adoption_slides.pdf
-inst/cheatsheet/Cheatsheet_v1-rtables.pdf
-inst/cheatsheet/Cheatsheet_v1-rtables.pptx
+^inst/extdata$
+^inst/cheatsheet$
 ^pkgdown$

DESCRIPTION

@@ -44,6 +44,7 @@ Suggests:
     dplyr (>= 1.0.5),
     flextable (>= 0.8.4),
     knitr (>= 1.42),
+    lifecycle (>= 0.2.0),
     officer (>= 0.5.0),
     r2rtf (>= 0.3.2),
     rmarkdown (>= 2.19),
@@ -58,9 +59,9 @@ VignetteBuilder:
 Config/Needs/verdepcheck: insightsengineering/formatters,
     tidyverse/magrittr, mllg/checkmate, rstudio/htmltools,
     gagolews/stringi, tidymodels/broom, cran/car, tidyverse/dplyr,
-    davidgohel/flextable, yihui/knitr, davidgohel/officer, Merck/r2rtf,
-    rstudio/rmarkdown, r-lib/testthat, tidyverse/tibble, tidyverse/tidyr, r-lib/withr,
-    r-lib/xml2
+    davidgohel/flextable, yihui/knitr, r-lib/lifecycle, davidgohel/officer, 
+    Merck/r2rtf, rstudio/rmarkdown, r-lib/testthat, tidyverse/tibble, 
+    tidyverse/tidyr, r-lib/withr, r-lib/xml2
 Encoding: UTF-8
 Language: en-US
 LazyData: true
@@ -74,14 +75,14 @@ Collate:
     'utils.R'
     'colby_constructors.R'
     'compare_rtables.R'
-    'deprecated.R'
     'format_rcell.R'
     'indent.R'
     'make_subset_expr.R'
     'simple_analysis.R'
     'split_funs.R'
     'make_split_fun.R'
     'summary.R'
+    'package.R'
     'tree_accessors.R'
     'tt_afun_utils.R'
     'tt_compare_tables.R'

NAMESPACE

@@ -168,7 +168,6 @@ export(split_rows_by_multivar)
 export(split_rows_by_quartiles)
 export(str)
 export(summarize_row_groups)
-export(summarize_rows)
 export(table_shell)
 export(table_shell_str)
 export(table_structure)
@@ -181,7 +180,6 @@ export(trim_levels_in_facets)
 export(trim_levels_in_group)
 export(trim_levels_to_map)
 export(trim_rows)
-export(trim_zero_rows)
 export(tt_at_path)
 export(tt_to_flextable)
 export(update_ref_indexing)

NEWS.md

@@ -11,6 +11,9 @@
  * Fixed `sort_at_path` pathing to ignore leading `"root"` element (regardless of actual root element name) to match current `tt_at_path` behavior.
  * Fixed `section_div` for analysis of multiple variables (`AnalyzeMultiVars`).
 
+### Miscellaneous
+* Removed deprecated functions `add_analyzed_var` and `trim_zero_rows`.
+
 ## rtables 0.6.6
 ### New Features
  * Removed `ref_group` reordering in column splits so not to change the order.