setup-r-deps: replace github-token param with GITHUB_PAT env var
#1348
Workflow file for this run
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| --- | |
| name: SuperLinter 🦸♀️ | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| types: | |
| - opened | |
| - synchronize | |
| - reopened | |
| - ready_for_review | |
| branches: | |
| - main | |
| workflow_dispatch: | |
| workflow_call: | |
| inputs: | |
| lintr_error_on_lint: | |
| description: Produce an error when lints are found | |
| required: false | |
| type: boolean | |
| default: true | |
| lint-all-files: | |
| description: Lint all files every time | |
| default: false | |
| required: false | |
| type: boolean | |
| concurrency: | |
| group: lint-${{ github.event.pull_request.number || github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| lint: | |
| name: SuperLinter 🦸♂️ | |
| runs-on: ubuntu-latest | |
| if: > | |
| !contains(github.event.commits[0].message, '[skip linter]') | |
| && github.event.pull_request.draft == false | |
| steps: | |
| - name: Get branch names 🌿 | |
| id: branch-name | |
| uses: tj-actions/branch-names@v7 | |
| - name: Checkout repo (PR) 🛎 | |
| uses: actions/[email protected] | |
| if: github.event_name == 'pull_request' | |
| with: | |
| ref: ${{ steps.branch-name.outputs.head_ref_branch }} | |
| repository: ${{ github.event.pull_request.head.repo.full_name }} | |
| fetch-depth: 0 | |
| - name: Checkout repo 🛎 | |
| uses: actions/[email protected] | |
| if: github.event_name != 'pull_request' | |
| with: | |
| ref: ${{ steps.branch-name.outputs.head_ref_branch }} | |
| fetch-depth: 0 | |
| - name: Check commit message 💬 | |
| run: | | |
| git config --global --add safe.directory $(pwd) | |
| export head_commit_message="$(git show -s --format=%B | tr '\r\n' ' ' | tr '\n' ' ')" | |
| echo "head_commit_message = $head_commit_message" | |
| if [[ $head_commit_message == *"$SKIP_INSTRUCTION"* ]]; then | |
| echo "Skip instruction detected - cancelling the workflow." | |
| exit 1 | |
| fi | |
| shell: bash | |
| env: | |
| SKIP_INSTRUCTION: "[skip linter]" | |
| - name: Override SuperLinter configs 💾 | |
| run: | | |
| # Override markdownlint default config | |
| [ ! -e .markdownlint.yaml ] && cat > .markdownlint.yaml <<EOF | |
| ############### | |
| # Rules by id # | |
| ############### | |
| MD004: false # Unordered list style | |
| MD007: | |
| indent: 2 # Unordered list indentation | |
| MD013: | |
| line_length: 800 # Line length | |
| MD026: | |
| punctuation: ".,;:!。，；:" # List of not allowed | |
| MD029: false # Ordered list item prefix | |
| MD033: false # Allow inline HTML | |
| MD036: false # Emphasis used instead of a heading | |
| ################# | |
| # Rules by tags # | |
| ################# | |
| blank_lines: true # Error on blank lines | |
| EOF | |
| shell: bash | |
| - name: Lint Code Base 🧶 | |
| uses: super-linter/super-linter/slim@v5 | |
| env: | |
| LINTER_RULES_PATH: / | |
| DEFAULT_BRANCH: ${{ github.event.repository.default_branch }} | |
| FILTER_REGEX_EXCLUDE: NEWS.md|design/.*|testthat/_snaps/.* | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| VALIDATE_ALL_CODEBASE: false | |
| VALIDATE_BASH: true | |
| VALIDATE_DOCKERFILE: true | |
| VALIDATE_MARKDOWN: true | |
| MARKDOWN_CONFIG_FILE: .markdownlint.yaml | |
| VALIDATE_YAML: true | |
| lint-r-code: | |
| name: Lint R code 🧶 | |
| runs-on: ubuntu-latest | |
| if: > | |
| !contains(github.event.commits[0].message, '[skip linter]') | |
| && github.event.pull_request.draft == false | |
| container: | |
| image: ghcr.io/insightsengineering/rstudio:latest | |
| steps: | |
| - name: Checkout repo (PR) 🛎 | |
| uses: actions/[email protected] | |
| if: github.event_name == 'pull_request' | |
| with: | |
| ref: ${{ github.event.pull_request.head.sha }} | |
| fetch-depth: 0 | |
| - name: Checkout repo 🛎 | |
| uses: actions/[email protected] | |
| if: github.event_name != 'pull_request' | |
| with: | |
| fetch-depth: 0 | |
| - name: Check commit message 💬 | |
| run: | | |
| git config --global --add safe.directory $(pwd) | |
| export head_commit_message="$(git show -s --format=%B | tr '\r\n' ' ' | tr '\n' ' ')" | |
| echo "head_commit_message = $head_commit_message" | |
| if [[ $head_commit_message == *"$SKIP_INSTRUCTION"* ]]; then | |
| echo "Skip instruction detected - cancelling the workflow." | |
| exit 1 | |
| fi | |
| shell: bash | |
| env: | |
| SKIP_INSTRUCTION: "[skip linter]" | |
| - name: Changed files 🖋️ | |
| if: github.event_name != 'workflow_dispatch' | |
| id: files | |
| uses: Ana06/[email protected] | |
| with: | |
| format: 'json' | |
| filter: '*' | |
| - name: Lint 🧶 | |
| run: | | |
| github_event_name <- "${{ github.event_name }}" | |
| cat(paste0("GitHub event name = ", github_event_name, "\n")) | |
| exclusions_list <- NULL | |
| if (!(identical("${{ inputs.lint-all-files }}", "true") || identical(github_event_name, "workflow_dispatch"))) { | |
| changed_files <- jsonlite::fromJSON('${{ steps.files.outputs.added_modified }}') | |
| all_files <- list.files(recursive = TRUE) | |
| exclusions_list <- as.list(setdiff(all_files, changed_files)) | |
| cat("Linting only changed files:\n") | |
| cat(changed_files) | |
| cat("\n\n") | |
| } else { | |
| cat("Linting all files.\n") | |
| } | |
| lints <- lintr::lint_package(exclusions = exclusions_list) | |
| if (length(lints) > 0L) { | |
| print(lints) | |
| if (identical("${{ inputs.lintr_error_on_lint }}", "true")) { | |
| stop("Lints detected. Please review and adjust code according to the comments provided.", call. = FALSE) | |
| } | |
| } | |
| shell: Rscript {0} |